Escherichia coli O83 H1 NRG 857C (AIEC): NRG857_09020
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Entry
NRG857_09020 CDS
T02068
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
eln
Escherichia coli O83:H1 NRG 857C (AIEC)
Brite
KEGG Orthology (KO) [BR:
eln00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
eln03016
]
NRG857_09020
Enzymes [BR:
eln01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
NRG857_09020
Transfer RNA biogenesis [BR:
eln03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
NRG857_09020
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GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNAseD_HRDC_C
HRDC
Motif
Other DBs
NCBI-ProteinID:
ADR27227
UniProt:
A0A0H3EJR7
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All DBs
Position
complement(1857895..1859010)
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AA seq
371 aa
AA seq
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MITTDDALASLCEAVRAFPAIALDTEFVRTRTYYPQLGLIQLFDGEHLALIDPLGITDWS
PLKAILRDPSITKFLHAGSEDLEVFLNVFGELPQPLIDTQILAAFCGRPMSWGFASMVEE
YSGVTLDKSESRTDWLARPLTERQCEYAAADVWYLLPITAKLMVETEASGWLPAALDECR
LMQMRRQEVVAPEDAWRDITNAWQLRTRQLACLQLLADWRLRKARERDLAVNFVVREEHL
WSVARYMPGSLGELDSLGLSGSEIRFHGKTLLALVEKAQALPEEALPQPMLNLMDMPGYR
KAFKAIKSLITDVSETHKISAELLASRRQINQLLNWHWKLKPQNNLPELISGWRGELMAE
ALHNLLQEYPQ
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atgattaccacggacgatgcgctggcttctttgtgtgaagccgtccgtgcctttccggcg
atagccctggatactgaatttgttcgtacgcgcacttattacccgcagctgggtttaatt
caactttttgatggtgagcatctggcgctaatcgatccactcgggatcaccgactggtca
ccgctgaaagcgatcctgcgcgatccgtccatcacaaaatttcttcatgcaggtagtgaa
gatctggaagtgttcctcaatgtctttggcgaattaccacaacccttgattgacacgcaa
atccttgctgccttctgcggacgcccgatgtcatggggtttcgcttccatggtggaagag
tattccggcgttacgctggacaagagtgaatcgcgcaccgactggctggccagaccgctg
accgaacgtcagtgtgaatatgcagcggcggatgtctggtatctgttaccgatcaccgca
aagcttatggtagaaacggaggcctccggctggctacctgcggcgctggatgaatgccgc
ctgatgcaaatgcgtcgtcaggaagtcgttgcgccggaagacgcctggcgtgatatcacc
aatgcctggcaattacgcacacgccaactggcctgtctgcaactgttagccgactggcga
ttgcgcaaggcgcgagagcgcgatctggcggtgaactttgtcgtgcgtgaagagcatttg
tggtcggtagcgcgttatatgccgggaagtctgggcgaactggacagcctgggcttatcc
ggtagcgaaatccgcttccacggtaaaacgttgctggcgctggtggaaaaagcgcaggca
ttgccggaagaggccttaccgcagccgatgcttaacctgatggacatgccgggttatcgt
aaagcgtttaaagcgattaagtcgctgattactgacgtcagcgaaacgcacaagatcagc
gccgaattgctggcatcgcgtcggcaaatcaaccaactgctgaactggcactggaaactg
aaaccgcagaacaatttgccggagctgatttccggctggcgtggtgagctgatggcggaa
gcattacacaatttattgcaggaatatccacagtaa
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