Escherichia coli O83 H1 NRG 857C (AIEC): NRG857_13435
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Entry
NRG857_13435 CDS
T02068
Name
(GenBank) RNA polymerase sigma factor RpoS
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
eln
Escherichia coli O83:H1 NRG 857C (AIEC)
Pathway
eln02026
Biofilm formation - Escherichia coli
Brite
KEGG Orthology (KO) [BR:
eln00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02026 Biofilm formation - Escherichia coli
NRG857_13435
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
eln03021
]
NRG857_13435
Transcription machinery [BR:
eln03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
NRG857_13435
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Sigma70_r4
Sigma70_r1_2
Motif
Other DBs
NCBI-ProteinID:
ADR28100
UniProt:
A0A0H3EKA9
LinkDB
All DBs
Position
complement(2826866..2827858)
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AA seq
330 aa
AA seq
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MSQNTLKVHDLNEDAEFDENGVEVFDEKALVEEEPSDNDLAEEELLSQGATQRVLDATQL
YLGEIGYSPLLTAEEEVYFARRALRGDVASRRRMIESNLRLVVKIARRYGNRGLALLDLI
EEGNLGLIRAVEKFDPERGFRFSTYATWWIRQTIERAIMNQTRTIRLPIHIVKELNVYLR
TARELSHKLDHEPSAEEIAEQLDKPVDDVSRMLRLNERITSVDTPLGGDSEKALLDILAD
EKENGPEDTTQDDDMKQSIVKWLFELNAKQREVLARRFGLLGYEAATLEDVGREIGLTRE
RVRQIQVEGLRRLREILQTQGLNIEALFRE
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgagtcagaatacgctgaaagttcatgatttaaatgaagatgcggaatttgatgagaac
ggagttgaggtttttgacgaaaaggccttagtagaagaggaacccagtgataacgatttg
gccgaagaggaactgttatcgcagggagccacacagcgtgtgttggacgcgactcagctt
taccttggtgagattggttattcaccactgttaacggccgaagaagaagtttattttgcg
cgtcgcgcactgcgtggagatgttgcctcccgccgccggatgatcgagagtaacttgcgt
ctggtggtaaaaattgcccgccgttatggcaatcgtggtctggcgttgctggacctgatc
gaagagggcaacctggggctgatccgcgcggtagagaagtttgacccggaacgtggtttc
cgcttctcaacatacgcaacctggtggattcgccagacgatcgaacgggcgattatgaac
caaacccgtactattcgtttgccgattcacatcgtaaaggagctgaacgtttacctgcga
accgcacgtgagttgtcccataagctggaccacgaaccaagtgcggaagagatcgcagag
caactggataagccagttgatgacgtcagccgtatgcttcgtcttaacgagcgcattacc
tcggtagacaccccgctgggtggtgattccgaaaaagcgttgctggacatcctggccgat
gaaaaagagaatggtccggaagataccacgcaagatgacgatatgaagcagagcatcgtc
aaatggctgttcgagctgaacgccaaacagcgtgaagtactggcacgtcgattcggtttg
ctggggtacgaagcggcaacactggaagatgtaggtcgtgaaattggcctcacccgtgaa
cgtgttcgccagattcaggttgaaggcctgcgccgtttgcgcgaaatcctgcaaacgcag
gggctgaatatcgaagcgctgttccgcgagtaa
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