Escherichia coli O83 H1 NRG 857C (AIEC): NRG857_18785
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Entry
NRG857_18785 CDS
T02068
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
eln
Escherichia coli O83:H1 NRG 857C (AIEC)
Pathway
eln03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
eln00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NRG857_18785 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
eln03021
]
NRG857_18785 (rho)
03019 Messenger RNA biogenesis [BR:
eln03019
]
NRG857_18785 (rho)
Transcription machinery [BR:
eln03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
NRG857_18785 (rho)
Messenger RNA biogenesis [BR:
eln03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
NRG857_18785 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
OB_RNB
AAA_22
AAA_25
S1CSD-TOTE-2
AAA
FtsK_SpoIIIE
Motif
Other DBs
NCBI-ProteinID:
ADR29165
UniProt:
A0A0H3EP52
LinkDB
All DBs
Position
3986559..3987890
Genome browser
AA seq
443 aa
AA seq
DB search
MDDPAIPFTTLSSRFTPSLRTHTTMNLTELKNTPVSELITLGENMGLENLARMRKQDIIF
AILKQHAKSGEDIFGDGVLEILQDGFGFLRSADSSYLAGPDDIYVSPSQIRRFNLRTGDT
ISGKIRPPKEGERYFALLKVNEVNFDKPENARNKILFENLTPLHANSRLRMERGNGSTED
LTARVLDLASPIGRGQRGLIVAPPKAGKTMLLQNIAQSIAYNHPDCVLMVLLIDERPEEV
TEMQRLVKGEVVASTFDEPASRHVQVAEMVIEKAKRLVEHKKDVIILLDSITRLARAYNT
VVPASGKVLTGGVDANALHRPKRFFGAARNVEEGGSLTIIATALIDTGSKMDEVIYEEFK
GTGNMELHLSRKIAEKRVFPAIDYNRSGTRKEELLTTQEELQKMWILRKIIHPMGEIDAM
EFLINKLAMTKTNDDFFEMMKRS
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atggatgatcctgccataccattcacaacattaagttcgagatttaccccaagtttaaga
actcacaccactatgaatcttaccgaattaaagaatacgccggtttctgagctgatcact
ctcggcgaaaatatggggctggaaaacctggctcgtatgcgtaagcaggacattattttt
gccatcctgaagcagcacgcaaagagtggcgaagatatctttggtgatggcgtactggag
atattgcaggatggatttggtttcctccgttccgcagacagctcctacctcgccggtcct
gatgacatctacgtttcccctagccaaatccgccgtttcaacctccgcactggtgatacc
atctctggtaagattcgcccgccgaaagaaggtgaacgctattttgcgctgctgaaagtt
aacgaagttaacttcgacaaacctgaaaacgcccgcaacaaaatcctctttgagaactta
accccgctgcacgcaaactctcgtctgcgtatggaacgtggtaacggttctacggaagat
ttaaccgctcgcgtactggatctggcatcacctatcggtcgtggtcagcgtggtctgatt
gtggcaccgccgaaagccggtaaaaccatgctgctgcagaacattgctcagagcattgct
tacaaccacccggattgtgtgctgatggttctgctgatcgacgaacgtccggaagaagta
accgagatgcagcgtctggtaaaaggtgaagttgttgcttctacctttgacgaacccgca
tctcgccacgttcaggttgcggaaatggtgatcgagaaggcgaaacgcctggttgagcac
aagaaagacgttatcattctgctcgactccatcactcgtctggcgcgcgcttacaacacc
gttgttccggcgtcaggtaaagtgttgaccggtggtgtggacgccaacgccctgcatcgt
ccgaaacgcttcttcggtgcggcgcgtaacgtggaagagggcggcagcctgaccattatc
gcgacggcgcttatcgataccggttctaaaatggacgaagttatctacgaagagtttaaa
ggtacaggcaacatggaactgcacctctctcgtaagatcgctgaaaaacgcgtcttcccg
gctatcgactacaaccgttccggtacccgtaaagaagagctgctcacgactcaggaagaa
ctgcagaaaatgtggatcctgcgcaaaatcattcacccgatgggcgaaatcgatgcaatg
gaattcctcattaataaactggcaatgaccaagaccaatgacgatttcttcgaaatgatg
aaacgctcataa
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