Escherichia coli O44 H18 042 (EAEC): EC042_2077
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Entry
EC042_2077 CDS
T02067
Symbol
sdiA
Name
(GenBank) regulatory protein
KO
K07782
LuxR family transcriptional regulator, quorum-sensing system regulator SdiA
Organism
elo
Escherichia coli O44:H18 042 (EAEC)
Pathway
elo02020
Two-component system
elo02024
Quorum sensing
elo02026
Biofilm formation - Escherichia coli
Brite
KEGG Orthology (KO) [BR:
elo00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
EC042_2077 (sdiA)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
EC042_2077 (sdiA)
02026 Biofilm formation - Escherichia coli
EC042_2077 (sdiA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
elo03000
]
EC042_2077 (sdiA)
Transcription factors [BR:
elo03000
]
Prokaryotic type
Helix-turn-helix
LuxR family
EC042_2077 (sdiA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Autoind_bind
GerE
Sigma70_r4_2
HTH_20
Sigma70_r4
HTH_10
HTH_23
Motif
Other DBs
NCBI-ProteinID:
CBG34902
UniProt:
D3GXG8
LinkDB
All DBs
Position
complement(2168246..2168968)
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AA seq
240 aa
AA seq
DB search
MQDTDFFSWRRTMLLRFQRMEAAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFY
TNYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWNDDLFSEAQPLWEAARAHGLRRGVT
QYLMLPNRALGFLSFSRCSTREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNF
SKREKEILKWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atgcaggatacggattttttcagctggcgtcgcacgatgctgttgcgttttcagaggatg
gaggccgcagaagaggtctaccatgaaatagagcttcaggctcagcagctggagtacgat
tactattcgttatgtgttcgccacccggtaccattcacgcgacctaaagtggctttctac
accaattaccctgaggcttgggttagttattatcaggcaaaaaattttctcgcaattgat
cctgtgctgaaccctgaaaactttagtcagggccatttaatgtggaatgatgacttattc
agcgaagctcagccgttatgggaagccgcgcgcgcgcatggtttacgccgcggtgtcact
cagtatttaatgctgccaaatcgggcgctgggctttttgtccttttcccgttgcagcacg
cgcgaaatacccattcttagtgatgaactgcaattaaaaatgcagttactggtgcgcgaa
agtctgatggctctgatgcgtttaaatgatgaaatagtgatgacgccagagatgaatttc
agcaagcgcgaaaaagaaattctgaaatggacggcggaagggaagacatcagcagagata
gcgatgattttgtcaatctctgagaatacggtcaatttccatcagaaaaacatgcagaaa
aaaatcaatgcaccaaataagacccaggtggcctgttacgcggccgctactggcttaatt
tga
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