Escherichia coli O44 H18 042 (EAEC): EC042_2322
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Entry
EC042_2322 CDS
T02067
Symbol
gatR
Name
(GenBank) galactitol utilization operon repressor
KO
K02436
DeoR family transcriptional regulator, galactitol utilization operon repressor
Organism
elo
Escherichia coli O44:H18 042 (EAEC)
Brite
KEGG Orthology (KO) [BR:
elo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
elo03000
]
EC042_2322 (gatR)
Transcription factors [BR:
elo03000
]
Prokaryotic type
Helix-turn-helix
DeoR family
EC042_2322 (gatR)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DeoRC
HTH_DeoR
GntR
HTH_11
CoA_trans
HTH_PafC
CggR_N
HTH_5
DUF977
FeoC
SelB_WH_2nd_bact
MarR
DsrD
Motif
Other DBs
NCBI-ProteinID:
CBG35157
UniProt:
D3GZE8
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All DBs
Position
complement(2432241..2433020)
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AA seq
259 aa
AA seq
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MTMNSFERRNKIIQLVNEQGTVLVQDLAGVFAASEATIRADLRFLEQKGVVTRFHGGAAK
IMSGNSETETQEVGFKERFQLASAPKNRIAQAAVKMIHEGMTVILDSGSTTMLIAEGLMT
AKNITVITNSLPAAFALSENKDITLVVCGGTVRHKTRSMHGSIAERSLQDINADLMFVGA
DGIDAVNGITTFNEGYSISGAMVTAANKVIAVLDSSKFNRRGFNQVLPIEKIDIIITDDA
VSEVDKLALQKTRVKLITV
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atgacgatgaattcattcgagcgaaggaataagatcatccaattagtgaatgaacaggga
accgtgcttgttcaggatctggcgggagtatttgctgcctcggaagcgacaatccgtgcc
gatttgcgctttctcgaacaaaaaggcgtggttacgcgctttcatggcggtgcggcgaaa
ataatgtccggtaatagtgaaaccgagacccaggaagttgggtttaaagagcgatttcag
ctcgccagtgcgccaaaaaacagaatagcgcaggcggcagtcaaaatgatccacgaaggg
atgaccgttattctcgacagcggaagtaccacaatgcttatcgccgaaggattaatgacc
gccaaaaatatcacggtgattaccaacagtctcccggcagcatttgccctttccgaaaat
aaagacattactctggtcgtctgtggtgggaccgtccgccataaaacacgctcgatgcat
ggttccattgccgagcgttcattgcaggatattaatgccgatttaatgtttgtcggtgct
gatggtattgatgcggttaatggtattacgacctttaatgaaggttattcgattagcggg
gcgatggtcacagccgcaaataaagtgattgccgttctcgattcatcgaaatttaatcgt
cgcggttttaatcaggtactgccaatcgaaaaaatcgacattattattaccgacgatgct
gtgtcagaggtggataaactggcattgcagaagacacgggtgaaattaattacggtgtag
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