Escherichia coli O44 H18 042 (EAEC): EC042_2780
Help
Entry
EC042_2780 CDS
T02067
Symbol
srmB
Name
(GenBank) ATP-dependent RNA helicase
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
elo
Escherichia coli O44:H18 042 (EAEC)
Brite
KEGG Orthology (KO) [BR:
elo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
elo03009
]
EC042_2780 (srmB)
Enzymes [BR:
elo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
EC042_2780 (srmB)
Ribosome biogenesis [BR:
elo03009
]
Prokaryotic type
rRNA helicases
EC042_2780 (srmB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
CBG35613
UniProt:
D3H3T6
LinkDB
All DBs
Position
2967404..2968738
Genome browser
AA seq
444 aa
AA seq
DB search
MTVTTFSELELDESLLEALQDKGFTRPTAIQAAAIPPALDGRDVLGSAPTGTGKTAAYLL
PALQHLLDFPRKKSGPPRILILTPTRELAMQVADHARELAKHTHLDIATITGGVAYMNHA
EVFSENQDIVVATTGRLLQYIKEENFDCRAVETLILDEADRMLDMGFAQDIEHIAGETRW
RKQTLLFSATLEGDAIQDFAERLLEDPVEVSANPSTRERKKIHQWYYRADDLEHKTALLV
HLLKQPEATRSIVFVRKRERVHELANWLREAGINNCYLEGEMVQGKRNEAIKRLTEGRVN
VLVATDVAARGIDIPDVSHVFNFDMPRSGDTYLHRIGRTARAGRKGTAISLVEAHDHLLL
GKVGRYIEEPIKARVIDELRPKTRAPSEKQTGKPSKKVLAKRAEKKKAKEKEKPRVKKRH
RDTKNIGKRRKPSGTGVPPQTTEE
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgactgtaacgactttttccgaacttgaactcgacgaaagcctgctggaagcactccag
gataaaggtttcactcgcccgaccgccattcaggctgccgccattccgcctgcgctcgat
ggccgtgatgtactcggttctgcgccgacaggcaccggtaaaacggcggcgtatctgctg
ccagcgttgcagcacctgctcgatttcccacgtaagaaatccggtccgccgcgtattttg
atcctcaccccaactcgcgagctggcgatgcaggtggccgatcatgcccgcgaactggcg
aaacatacgcatctggatatcgccaccatcaccggcggcgtagcctatatgaaccacgcg
gaagtgttcagcgaaaatcaggacatcgtggtcgccacgaccggacgtttgctgcaatac
ataaaagaagagaacttcgattgccgcgcggttgaaactcttatcctcgacgaagcagac
cgtatgctggatatgggcttcgctcaggatatcgaacatattgctggcgaaacgcgctgg
cgtaaacagaccctgctcttttccgcaacgctggaaggcgatgcgattcaggactttgcc
gagcgtctgctggaagatccggtggaagtttctgcgaatccctccacccgtgagcgcaaa
aagatccatcagtggtattaccgcgccgatgatcttgagcataaaaccgcgttgctggtg
cacctgttaaaacagcctgaagcgactcgctcaattgtgtttgtgcgtaagcgtgagcgt
gtgcatgagctggcaaactggctgcgcgaggcgggcatcaacaactgctatctcgaaggt
gagatggtacaaggcaagcgtaacgaagcgatcaagcgtttgaccgaaggccgcgtaaac
gtactggttgccaccgatgttgctgcacgcggtatcgacattcctgatgtcagccacgtc
tttaacttcgatatgccgcgtagtggtgatacttatttgcaccgtatcggacgtaccgcg
cgcgccggtcgtaaaggcaccgcaatttcgctagtggaagcccatgaccatctgctgcta
ggcaaagttggccgttatattgaagagccaattaaagctcgcgtaattgatgagttacgc
ccgaaaacgcgtgcaccaagcgagaagcagaccggcaagccatcgaagaaagtgctggct
aaacgcgccgagaagaaaaaagctaaagagaaagagaagccgcgagtgaaaaaacgccat
cgcgataccaaaaatattggtaagcgccgtaaaccaagcggaacgggcgtgccaccgcaa
acgacagaagagtaa
DBGET
integrated database retrieval system
