Escherichia coli O44 H18 042 (EAEC): EC042_3103
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Entry
EC042_3103 CDS
T02067
Symbol
recJ
Name
(GenBank) single-stranded DNA-specific exonuclease
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
elo
Escherichia coli O44:H18 042 (EAEC)
Pathway
elo03410
Base excision repair
elo03430
Mismatch repair
elo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
elo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
EC042_3103 (recJ)
03430 Mismatch repair
EC042_3103 (recJ)
03440 Homologous recombination
EC042_3103 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
elo03400
]
EC042_3103 (recJ)
DNA repair and recombination proteins [BR:
elo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
EC042_3103 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
EC042_3103 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
EC042_3103 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
PEP-utilizers
Motif
Other DBs
NCBI-ProteinID:
CBG35929
UniProt:
D3GTQ7
LinkDB
All DBs
Position
complement(3314158..3315891)
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AA seq
577 aa
AA seq
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MKQQIQLRRREVDETADLPAELPPLLRRLYASRGVRSAQELERSVKGMLPWQQLSGVEKA
VEILYNAFREGTRIIVVGDFDADGATSTALSVLAMRSLGCSNIDYLVPNRFEDGYGLSPE
VVDQAHARGAQLIVTVDNGISSHVGVEHARSLGIPVIVTDHHLPGDTLPAAEAIINPNLR
DCNFPSKSLAGVGVAFYLMLALRTFLRDQGWFDERGIAIPNLAELLDLVALGTVADVVPL
DANNRILTWQGMSRIRAGKCRPGIKALLEVANRDAQKLAASDLGFALGPRLNAAGRLDDM
SVGVALLLCDNIGEARVLANELDALNQTRKEIEQGMQVEALTLCEKLERSRDTLPGGLAM
YHPEWHQGVVGILASRIKERFHRPVIAFAPAGDGTLKGSGRSIQGLHMRDALERLDTLYP
GMMLKFGGHAMAAGLSLEEDKFELFQQRFGELVTEWLDPSLLQGEVVSDGPLSPAEMTME
VAQLLRDAGPWGQMFPEPLFDGHFRLLQQRLVGERHLKVMVEPVGGGPLLDGIAFNVDTA
LWPDNGVREVQLAYKLDINEFRGNRSLQIIIDNIWPI
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
gtgaaacaacagatacaacttcgtcgccgtgaagtcgatgaaacggcagacttgcccgcg
gaattgcctcccttgctgcgccgtttatacgccagccggggagtgcgcagtgcgcaagaa
ctggaacgcagtgttaaaggtatgctgccctggcagcaactgagcggcgtcgaaaaggcc
gttgagatcctttacaacgcctttcgcgaaggaacgcggattattgtggtcggtgatttc
gacgccgacggtgccaccagcacggctctaagcgtgctggcgatgcgctcgcttggttgc
agcaatatcgactacctggttccaaaccgtttcgaagacggttacggcttaagcccggaa
gtggtcgatcaggcccatgcccgtggcgcgcagttaattgttaccgtggataacggtatt
tcctcccatgtgggggttgaacacgctcgctcgttgggcatcccggttattgttaccgat
caccatttgccgggcgacacattacccgcagcggaagcgatcattaaccctaacttgcgc
gactgtaatttcccgtcgaaatcactggcaggcgtgggtgtggcgttttatctgatgctg
gcgctgcgcacctttttgcgcgatcagggctggtttgatgagcgcggcatcgcaattcct
aatctggcagaactgctggatctggtcgcgctgggaacagtggcggacgtcgtgccgctg
gacgctaataatcgcattctgacgtggcaggggatgagtcgcatccgtgccggaaagtgc
cgtccggggattaaagcgctgcttgaagtggcaaaccgtgatgcacaaaaactcgccgct
agcgatttaggttttgcgctggggccacgtctcaatgctgccgggcgactggacgatatg
tccgttggtgtagcgctgttgttgtgtgacaacatcggtgaagcgcgcgtgctggcaaat
gaactcgatgcgctaaaccagacgcgaaaagagatcgaacaaggaatgcaggttgaagcc
ctgaccctgtgcgagaaactggagcgaagtcgcgacacgctacccggcgggctggcaatg
tatcaccccgaatggcatcagggcgttgtcggtattctggcttcgcgcatcaaagagcgt
tttcaccgtccggttatcgcgtttgcgccagcaggtgacggtacgctgaaaggttccggt
cgctccattcaggggctgcatatgcgtgatgcgctggagcgattagacacactctacccc
ggcatgatgctgaagtttggcggtcatgcgatggcggcgggtttgtcgctggaagaggat
aaattcgaactctttcaacaacggtttggcgaactggttactgagtggctggacccttca
ctattgcaaggcgaagtggtgtcagacggcccgttaagcccggccgaaatgaccatggaa
gtagcgcagctgctgcgcgatgctggcccgtgggggcagatgttcccggagccgctgttt
gacggtcatttccgtctgctgcaacagcggctggtgggtgagcgtcatttgaaagtcatg
gtcgagccggtcggcggcggtccgctgctggatggtattgcttttaatgtcgataccgcc
ctctggccggataacggcgtgcgcgaagtgcaactggcttacaagctcgatatcaacgag
tttcgcggcaaccgcagcctgcaaattatcattgacaatatctggccaatttag
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