KEGG   Escherichia coli O44 H18 042 (EAEC): EC042_3682
Entry
EC042_3682        CDS       T02067                                 
Symbol
rtcR
Name
(GenBank) transcriptional regulator
  KO
K14414  transcriptional regulatory protein RtcR
Organism
elo  Escherichia coli O44:H18 042 (EAEC)
Brite
KEGG Orthology (KO) [BR:elo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:elo03000]
    EC042_3682 (rtcR)
Transcription factors [BR:elo03000]
 Prokaryotic type
  Other transcription factors
   Others
    EC042_3682 (rtcR)
SSDB
Motif
Pfam: RtcR Sigma54_activat Sigma54_activ_2 AAA_5 AAA Mg_chelatase NACHT AAA_16 AAA_22 AAA_30 AAA_7 AAA_33 AAA_19 AAA_2 AAA_14 T2SSE ATPase_2 TsaE ResIII MCM NPHP3_N NB-ARC
Other DBs
NCBI-ProteinID: CBG36507
UniProt: D3GZN9
LinkDB
Position
3904588..3906186
AA seq 532 aa
MRKTVAFGFVGTVLDYAGRGSQRWSKWRPTLCLCQQESLVIDRLELLHDARSRSLFETLK
RDIASVSPETEVVGVEIELHNPWDFEEVYACLHDFARGYAFQPEKEDYLIHITTGTHVAQ
ICWFLLAEARYLPVRLIQSSPPRKKEQPRGAGEVTIIDLDLSRYNAIASRFAEERQQTLD
FLKSGIATRNPHFNRMIEQIEKVAIKSRAPILLNGPTGAGKSFLARRIFELKQARHQFSG
AFVEVNCATLRGDTAMSTLFGHVKGAFTGARESREGLLRSANGGMLFLDEIGELGADEQA
MLLKAIEEKTFYPFGSDRQVSSDFQLIAGTVRDLRQLVAEGKFREDLYARINLWTFTLPG
LRQRQEDIEPNLDYEVERHAALTGDSVRFNTEARRAWLAFATSPQATWRGNFRELSASVT
RMATFADSGRITLETVEDEINRLRYNWQESRPSALPALLGAEAENIDLFDRLQLEHVIAI
CRQAKSLSAAGRQLFDVSRQGKASVNDADRLRKYLARFGLTWEAVQDQHSSS
NT seq 1599 nt   +upstreamnt  +downstreamnt
atgcgtaaaacagtggcttttggttttgtcggaacggtgctggattatgccgggcgcggc
agtcagcgctggtcgaaatggcgtccgacgctttgtttatgccagcaagaatcgttggtc
atcgatcgactggaattattgcatgacgcccgctcgcgctcgctatttgaaacgcttaaa
cgcgatatcgccagcgtttcgccagaaacagaagtggtgggcgttgagatagaactgcat
aacccgtgggatttcgaagaggtctacgcctgcctgcatgatttcgcccgtggttacgcg
ttccagccagaaaaagaagactatttaattcacatcaccaccggtacccacgtcgcgcag
atttgctggtttctgctggcagaagcgcgttatctacccgtccggttgatacaatcttca
ccaccgcgcaaaaaagaacaaccgcgcggcgcaggtgaagtgacgattatcgatctcgat
ttaagccgttataacgccatcgccagccgctttgccgaggaacgccagcaaaccctcgat
ttcctcaaatccggcattgccacgcgtaacccccacttcaaccgcatgattgagcagatc
gaaaaagtggcgattaaatcccgcgcaccgatcctgctcaacggcccgaccggggcgggt
aagtcatttctggcgcgacgcatctttgaattgaaacaggcgcggcatcagtttagcggc
gcgtttgtggaagtgaactgcgccaccctgcgtggcgataccgccatgtcgacgctgttt
ggtcatgtgaaaggcgcgtttaccggggcgcgggagtcgcgggaaggattattacgcagc
gccaacggcgggatgttatttcttgatgagattggcgaactgggcgcagacgaacaggcg
atgttgctgaaagccattgaagagaaaaccttttacccatttggcagcgatcgccaggtg
agcagtgattttcagctgatcgccggaacggtgcgcgatttgcgccagctggttgccgaa
ggcaaatttcgcgaagacctgtacgcacgcattaatctctggaccttcaccctgccgggg
ctgcgccagcgccaggaagatatcgaaccgaacctggattatgaagtggagcgccacgcc
gcgcttactggcgacagcgtgcgttttaacaccgaagcacggcgcgcctggctggctttt
gcgacatctccccaggcaacatggcgcggtaactttcgagaactttctgccagcgtcacg
cggatggcaacctttgccgatagcgggcgcattactctggaaaccgtagaagatgagata
aaccgtctgcgctataactggcaggagagtcgcccctccgcgcttccggcgttgctgggc
gctgaggcagaaaacatcgacctctttgatcgactgcaactggaacacgtaatagccatc
tgccgccaggcaaagtcactttctgctgccggacgccagctttttgacgtttcgcgccag
ggcaaagccagcgtcaatgacgcggatcggctacgcaaatacctggcgcgttttggtctg
acgtgggaagccgtgcaggatcagcacagctccagttga

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