Escherichia coli O44 H18 042 (EAEC): EC042_4237
Help
Entry
EC042_4237 CDS
T02067
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
elo
Escherichia coli O44:H18 042 (EAEC)
Pathway
elo03030
DNA replication
elo03410
Base excision repair
elo03420
Nucleotide excision repair
elo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
elo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
EC042_4237 (polA)
03410 Base excision repair
EC042_4237 (polA)
03420 Nucleotide excision repair
EC042_4237 (polA)
03440 Homologous recombination
EC042_4237 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
elo03032
]
EC042_4237 (polA)
03400 DNA repair and recombination proteins [BR:
elo03400
]
EC042_4237 (polA)
Enzymes [BR:
elo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
EC042_4237 (polA)
DNA replication proteins [BR:
elo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
EC042_4237 (polA)
DNA repair and recombination proteins [BR:
elo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
EC042_4237 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
EC042_4237 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH
Prok-E2_E
HHH_5
Motif
Other DBs
NCBI-ProteinID:
CBG37064
UniProt:
D3H4Z5
LinkDB
All DBs
Position
4519162..4521948
Genome browser
AA seq
928 aa
AA seq
DB search
MVQIPQNPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAV
VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGT
LAREAEKAGRPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNKYGVPPELIIDFL
ALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNK
EVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAK
GAKPAARPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDS
LDNISANLVGLSFAIEPSVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQN
LKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKG
KNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRI
ERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLK
KTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYH
QAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIGPEDYVIVSADYSQIELRIMAHLSRD
KGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIP
RKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAE
RAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQI
HQLMENCTRLDVPLLVEVGSGENWDQAH
NT seq
2787 nt
NT seq
+upstream
nt +downstream
nt
atggttcagatcccccaaaatccacttatccttgtagatggttcatcttatctttatcgc
gcatatcacgcgtttcccccgctgactaacagcgcaggcgagccgaccggtgcgatgtat
ggtgtcctcaacatgctgcgcagtctgatcatgcaatataaaccgacgcatgcagcggtg
gtctttgacgccaagggaaaaacctttcgtgatgaactgtttgaacattacaaatcacat
cgcccgccaatgccggacgatctgcgtgcacaaatcgaacccttgcacgcgatggttaaa
gcgatgggactgccgctgctggcggtttctggcgtagaagcggacgacgttatcggtact
ctggcgcgggaagccgaaaaagccgggcgtccggtgctgatcagcactggcgataaagat
atggcgcagctggtgacgccaaatattacgcttatcaataccatgacgaataccatcctc
ggaccggaagaggtggtgaataagtacggcgtgccgccagaactgatcatcgacttcctg
gcgctgatgggtgactcctctgataacatccctggcgtaccgggcgtcggtgaaaaaacc
gcgcaggcattgctgcaaggtcttggcgggctggatacgctgtatgccgagccagaaaaa
attgctgggttgagcttccgtggcgcgaaaacaatggcagcgaagctcgagcaaaacaaa
gaagttgcttatctctcataccagctggcgacgattaaaaccgacgttgaactggagctg
acctgtgaacaactggaagtgcagcaaccggcggcggaagagttgttggggctgttcaaa
aagtatgagttcaaacgctggactgctgatgtcgaagcgggcaaatggttacaggctaaa
ggggcgaaacccgcagccaggccgcaggaaaccagtgttgcagacgaagcgccagaagtg
acggcaacggtgatttcttatgacaactacgtcaccatccttgatgaagaaacactgaaa
gcgtggattgcgaagctggaaaaagcgccggtatttgcatttgataccgaaaccgacagc
ctcgataacatctctgccaacctggtcgggctttcttttgctatcgagccaagcgtagcg
gcatatattccggttgctcatgattatcttgatgcgcccgatcaaatctctcgcgagcgt
gcactcgagttgctaaaaccgctgctggaagatgaaaaggcgctgaaggtcgggcaaaac
ctgaaatacgatcgcggtattctggcgaattacggcattgagctgcgtgggattgcgttt
gataccatgctggagtcctacattctcaatagcgttgccgggcgtcacgatatggacagc
ctcgcggaacgttggttgaagcacaaaaccatcacttttgaagagattgcgggtaaaggc
aaaaatcaactgacctttaaccagattgccctcgaagaggccggacgttacgccgccgaa
gatgcggatgtcaccttgcagttgcatctgaaaatgtggccggatctgcaaaaacacaaa
gggccgttgaacgtcttcgagaatatcgaaatgccgctggtgccggtgctttcacgcatt
gaacgtaacggtgtgaagatcgatccgaaagtgctgcacaatcattctgaagagctcact
cttcgtctggctgagctggaaaagaaagcgcatgaaattgcaggtgaggagtttaacctt
tcctccaccaagcagttgcaaaccattctgtttgaaaaacagggaattaaaccgctgaag
aaaacgccgggtggcgcgccgtcaacgtcggaagaggtactggaagaactggcgctggac
tatccgttgccaaaagtgattctggagtatcgtggtctggcgaagctgaaatcgacctac
accgacaagctgccgctgatgatcaacccgaaaaccgggcgtgtacatacctcttatcac
caggcagtaactgcaacgggacgtttatcgtcaaccgatcctaacctgcaaaacattccg
gtgcgtaacgaagaaggtcgtcgtatccgccaggcgtttattgggccagaggattatgtg
attgtctcggcggactactcgcagattgaactgcgcattatggcgcatctctcgcgtgac
aaaggcttgctgaccgcattcgcggaaggaaaagatatccaccgggctacggcggcagaa
gtgtttggtttgccactggaaaccgtcaccagcgagcaacgccgtagcgcgaaagcgatc
aactttggtctgatttatggcatgagtgctttcggtctggcgcggcaattgaacattcca
cgtaaagaagcgcagaagtacatggacctttacttcgaacgctaccctggcgtgctggag
tatatggaacgcacccgtgctcaggcgaaagagcagggctacgttgaaacactggacgga
cgccgtctgtatctgccggatatcaaatccagcaatggtgctcgtcgtgcagcggctgaa
cgtgcagccattaacgcgccaatgcagggaaccgccgccgacattatcaaacgggcgatg
attgccgttgatgcgtggctacaggctgagcaaccgcgtgtgcgtatgatcatgcaggta
cacgatgaactggtatttgaagttcataaagatgatgtcgatgccgtcgcgaagcagatt
catcaactgatggaaaactgtacccgtctggatgtgccgttgctggtggaagtggggagt
ggcgaaaactgggatcaggcgcactaa
DBGET
integrated database retrieval system
