Escherichia coli O44 H18 042 (EAEC): EC042_4782
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Entry
EC042_4782 CDS
T02067
Symbol
fecI
Name
(GenBank) RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
elo
Escherichia coli O44:H18 042 (EAEC)
Pathway
elo02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
elo00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
EC042_4782 (fecI)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
elo03021
]
EC042_4782 (fecI)
Transcription machinery [BR:
elo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
EC042_4782 (fecI)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
HTH_24
PhyR_sigma-like
HTH_36
HTH_23
HTH_28
HTH_11
TnsD
HAC6_helical
PCI
DUF2774
HTH_40
HTH_3
GerE
HTH_IclR
HTH_Mga
HTH_10
MarR
Motif
Other DBs
NCBI-ProteinID:
CBG37604
LinkDB
All DBs
Position
complement(5128363..5128884)
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AA seq
173 aa
AA seq
DB search
MSDRATTTASLTFESLYGTYHGWLKSWLTRKLQSAFDADDIAQDTFLRVMVSETLSTIRD
PRSFLCTIAKRVMVDLFRRNALEKAYLEMLALMPEGGAPSPEERESQLETLQLLDSMLDG
LNGKTREAFLLSQLDGLTYSEIAHKLGVSISSVKKYVAKAVEHCLLFRLEYGL
NT seq
522 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaccgcgccactaccacagcttccttaacgttcgagtcgctttatggcacatat
cacggctggttgaaaagctggctgacgcgcaaactccagtctgcttttgatgcagatgac
attgcccaggacacttttttgcgggtaatggtcagcgaaacgctctcgacgatccgcgat
cctcgctccttcctctgcactatcgccaaacgcgtgatggtggacctgtttcgccgaaac
gcgctggaaaaagcgtatctggagatgctggcgcttatgccggaggggggagcgccttca
cctgaggaacgcgaaagccaactcgagaccctacaactcctcgacagcatgctggacggg
ctaaacggcaaaacacgtgaagcgtttctgctttcgcaactggatggtctgacatacagc
gagattgcgcacaaactcggtgtttccatcagctccgtgaaaaaatacgtggcgaaagcc
gtcgagcactgcctgctgttccgtctggagtatgggttatga
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