Escherichia coli P12b: P12B_c0409
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Entry
P12B_c0409 CDS
T02030
Symbol
sbcC
Name
(GenBank) Nuclease sbcCD subunit C
KO
K03546
DNA repair protein SbcC/Rad50
Organism
elp
Escherichia coli P12b
Brite
KEGG Orthology (KO) [BR:
elp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
elp03400
]
P12B_c0409 (sbcC)
DNA repair and recombination proteins [BR:
elp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
P12B_c0409 (sbcC)
Archaeal homologous recombinant proteins
P12B_c0409 (sbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcC_Walker_B
AAA_23
SMC_N
Motif
Other DBs
NCBI-ProteinID:
AFG39291
LinkDB
All DBs
Position
complement(432734..435667)
Genome browser
AA seq
977 aa
AA seq
DB search
MTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCADGKILADKVKD
KLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTEIYGQISAMVFE
QHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQQEQQSLNWLTR
QDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWERIAEHSAALAHIRQ
QIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRFRQWNNEPAGWRAQ
FSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTADEVATALAQHAEQRPLRQHLVAL
HGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNEMRQRYKEKTQQLADVKTICEQEARIK
TLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEPGVNQSRLLALENEVKKLGEEGATLRG
QLDAITKQLQRDENEAQSLRQDEQALTQQWQAVTASLNITLQPLDDIQPWLDAQDEHERQ
LRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQLLLTTLTGYALTLPQEDEEESWLATRQ
QEAQSWQQRQNELTALQNRIQQLTPILETLPQSDELPHCEETVVLENWRQVHEQCLALHS
QQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLEN
QRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQ
QLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLA
NQQLTRLHGRYLLQRKASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLV
SHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVK
KINGLGYSKLESTFAVK
NT seq
2934 nt
NT seq
+upstream
nt +downstream
nt
atgacccgcgataccgccgaatgtctggcggaggtggagtttgaagtgaaaggtgaagcg
taccgtgcattctggagccagaatcgggcgcgtaaccaacccgacggtaatttgcaggtg
ccacgcgtagagctggcgcgctgcgccgacggcaaaattctcgccgacaaagtgaaagat
aagctggaactgacagcgacgttaaccgggctggattacgggcgcttcacccgttcgatg
ctgctttcgcaggggcaatttgctgccttcctgaatgccaaacccaaagaacgcgcggaa
ttgctcgaggagttaaccggcactgaaatctacgggcaaatctcggcgatggtttttgag
cagcacaaatcggcccgcacagagctggagaagctgcaagcgcaggccagcggcgtcacg
ttgctcacgccggaacaagtgcaatcgctgacagcgagtttgcaggtacttactgacgaa
gaaaaacagttaattaccgcgcagcagcaagaacaacaatcgctaaactggttaacgcgt
caggacgaattgcagcaagaagccagccgccgtcagcaggccttgcaacaggcgttagcc
gaagaagaaaaagcgcaacctcaactggcggcgcttagtctggcacaaccggcacgaaat
cttcgtccacactgggaacgcatcgcagaacacagcgcggcgctggcgcatattcgccag
cagattgaagaagtaaatactcgcttacagagcacaatggcgcttcgcgcgagcattcgc
caccacgcggcgaagcagtcagcagaattacagcagcagcaacaaagcctgaatacctgg
ttacaggaacacgaccgcttccgtcagtggaacaacgaaccggcgggttggcgtgcgcag
ttctcccaacaaaccagcgatcgcgagcatctgcggcaatggcagcaacagttaacccat
gctgagcaaaaacttaatgcgcttgcggcgatcacgttgacgttaaccgccgatgaagtt
gctaccgccctggcgcaacatgctgagcaacgcccactgcgtcagcacctggtcgcgctg
catggacagattgttccccaacaaaaacgtctggcgcagttacaggtcgctatccagaat
gtcacgcaagaacagacgcaacgtaacgccgcacttaacgaaatgcgccagcgttataaa
gaaaagacgcagcaacttgccgatgtgaaaaccatttgcgagcaggaagcgcgcatcaaa
acgctggaagctcaacgtgcacagttacaggcgggtcagccttgcccactttgtggttcc
accagccacccggcggtcgaggcgtatcaggcgctggagcctggcgttaatcagtctcga
ttactggcgctggaaaacgaagttaaaaagctcggtgaagaaggtgcgacgctacgtggg
caactggacgccataacaaagcagcttcagcgtgatgaaaacgaagcgcaaagcctccga
caagatgagcaagcacttactcaacaatggcaagccgtcacggccagcctcaatatcacc
ttgcagccactggacgatattcaaccgtggctggatgcacaagatgagcacgaacgccag
ctgcggttactcagccaacggcatgaattacaagggcagattgccgcgcataatcagcaa
attatccagtatcaacagcaaattgaacaacgccagcaactacttttaacgacattgacg
ggttatgcactgacattgccacaggaagatgaagaagagagctggttggcgacacgtcag
caagaagcgcagagctggcagcaacgccagaacgaattaaccgcgctgcaaaaccgtatt
cagcagctgacgccgattctggaaacgttgccgcaaagtgatgaactcccgcactgcgaa
gaaactgtggtattggaaaactggcggcaggtacatgaacaatgtctcgcattacacagc
cagcagcagacgttacagcaacaggatgttctggcggcgcaaagtctgcaaaaagcccag
gcgcagtttgacaccgcgctacaggccagcgtctttgacgatcagcaggcgttccttgcg
gcgctaatggatgaacaaacactaacgcagctggaacagctcaagcagaatctggaaaac
cagcgccgtcaggcgcaaactctggtcactcagacagcagaaacgctggcacagcatcaa
caacaccgacctgacgacgggttggctctcactgtgacggtggagcagattcagcaagag
ttagcgcaaactcaccaaaagttgcgtgaaaacaccacgagtcaaggcgagattcgccag
cagctgaagcaggatgcagataaccgtcagcaacaacaaaccttaatgcagcaaattgct
caaatgacgcagcaggttgaggactggggatatctgaattcgctaataggttccaaagag
ggcgataaattccgcaagtttgcccaggggctgacgctggataatttagtccatctcgct
aatcagcaacttacccggctgcacgggcgctatctgttacagcgcaaagccagcgaggcg
ctggaagtcgaggttgttgatacctggcaggcagatgcggtacgcgatacccgtaccctt
tccggcggcgaaagtttcctcgttagtctggcgctggcgctggcgctttcggatctggtc
agccataaaacacgtattgactcgctgttccttgatgaaggttttggcacgctggatagc
gaaacgctggataccgcccttgatgcgctggatgccctgaacgccagtggcaaaaccatc
ggtgtgattagccacgtagaagcgatgaaagagcgtattccggtgcagatcaaagtgaaa
aagatcaacggcctgggctacagcaaactggaaagtacgtttgcagtgaaataa
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