Escherichia coli P12b: P12B_c0410
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Entry
P12B_c0410 CDS
T02030
Symbol
sbcD
Name
(GenBank) Nuclease sbcCD subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
elp
Escherichia coli P12b
Brite
KEGG Orthology (KO) [BR:
elp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
elp03400
]
P12B_c0410 (sbcD)
DNA repair and recombination proteins [BR:
elp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
P12B_c0410 (sbcD)
Archaeal homologous recombinant proteins
P12B_c0410 (sbcD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
AFG39292
LinkDB
All DBs
Position
complement(435878..437104)
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AA seq
408 aa
AA seq
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MLFRQGTVMRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDT
GSPPSYARTLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAP
QILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLR
GDQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGM
EHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQ
LEQWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQ
QRETLSELSVEEVFNRRLALEELDESQQQRLQHLFTTTLHTLAGEHEA
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atgctttttcgccagggaaccgttatgcgcatccttcacacctcagactggcatctcggc
cagaacttctacagtaaaagccgcgaagctgaacatcaggcttttcttgactggctgctg
gagacagcacaaacccatcaggtggatgcgattattgttgccggtgatgttttcgatacc
ggctcgccgcccagttacgcccgcacgttatacaaccgttttgttgtcaatttacagcaa
actggctgtcatctggtggtactggcaggaaaccatgactcggtcgccacgctgaatgaa
tcgcgcgatatcatggcgttcctcaatactaccgtggtcgccagcgccggacatgcgccg
caaatcttgcctcgtcgcgacgggacgccaggcgcagtgctgtgccccattccgttttta
cgtccgcgtgacattattaccagccaggcggggcttaacggtattgaaaaacagcagcat
ttactggcagcgattaccgattattaccaacaacactatgccgatgcctgcaaactgcgc
ggcgatcagcctctgcccatcatcgccacgggacatttaacgaccgtgggggccagtaaa
agtgacgccgtgcgtgacatttatattggcacgctggacgcgtttccggcacaaaacttt
ccaccagccgactacatcgcgctcgggcatattcaccgcgcacagattattggcggcatg
gaacatgttcgctattgcggctcccccattccactgagttttgatgaatgcggtaagagt
aaatatgtccatctggtgacattttcaaacggcaaattagagagcgtggaaaacctgaac
gtaccggtaacgcaacccatggcagtgctgaaaggcgatctggcgtcgattaccgcacag
ctggaacagtggcgcgatgtatcgcaggagccacctgtctggctggatatcgaaatcact
actgatgagtatctgcatgatattcagcgcaaaatccaggcattaaccgaatcattgcct
gtcgaagtattgctggtacgtcggagtcgtgaacagcgcgagcgtgtgttagccagccaa
cagcgtgaaaccctcagcgaactcagcgtcgaagaggtgttcaatcgccgtctggcactg
gaagaactggatgaatcgcagcagcaacgtctgcagcatcttttcaccacgacgttgcat
accctcgccggagaacacgaagcatga
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