Escherichia coli P12b: P12B_c0516
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Entry
P12B_c0516 CDS
T02030
Symbol
ybbS
Name
(GenBank) HTH-type transcriptional activator allS
KO
K10972
LysR family transcriptional regulator, transcriptional activator of the allD operon
Organism
elp
Escherichia coli P12b
Brite
KEGG Orthology (KO) [BR:
elp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
elp03000
]
P12B_c0516 (ybbS)
Transcription factors [BR:
elp03000
]
Prokaryotic type
Helix-turn-helix
LysR family
P12B_c0516 (ybbS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_30
Motif
Other DBs
NCBI-ProteinID:
AFG39396
LinkDB
All DBs
Position
complement(551433..552359)
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AA seq
308 aa
AA seq
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MFDPETLRTFIAVAETGSFSKAAERLCKTTATISYRIKLLEENTGVALFFRTTRSVTLTA
AGEHLLSQARDWLSWLESMPSELQQVNDGVERQVNIVINNLLYNPQAVAQLLAWLNERYP
FTQFHISRQIYMGVWDSLLYEGFSLAIGVTGTEALANTFSLDPLGSVQWRFVMAADHPLA
NVEEPLTEAQLRRFPAVNIEDSARTLTKRVAWRLPGQKEIIVPDMETKIAAHLAGVGIGF
LPKSLCQSMIDNQQLVSRVIPTMRPPSPLSLAWRKFGSGKAVEDIVTLFTQRRPEISGFL
EIFGNPRS
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgttcgatccagaaaccttgcggactttcattgcggttgctgaaacaggaagtttttca
aaagcggcagaacgattatgtaaaaccacggcgacgatcagttatcgcattaaacttctg
gaagagaataccggagtagcgctgtttttccgtacgactcgcagcgtgacgttgacagcg
gctggcgagcatctactttcccaggccagagactggctgagctggctggaaagtatgcca
agcgagctgcaacaggtgaatgatggcgtggaacgccaggtgaatattgtcatcaacaac
ctgctctacaacccccaggccgtcgcccagttgctggcgtggctgaatgagcgttacccc
tttacccagtttcacatctcccgacaaatctatatgggcgtctgggactcgctattgtac
gaaggtttttcgctggctatcggcgtcacgggaactgaggcgctggcaaatacctttagt
cttgatcccttaggatcggtgcaatggcgctttgtcatggcggcggatcatccgctggcg
aacgttgaagagccgctaacagaagcgcagttgcggcgctttccggcggtcaatattgaa
gacagcgcccgcaccttaaccaaacgcgtcgcctggcgattgccagggcaaaaagagatt
attgttcccgatatggaaacgaaaatcgccgcccatctggcgggcgttggcattggtttt
ttgccaaaatcgctttgccagtcaatgatcgataatcaacaactggtcagccgggtaatc
ccaacgatgcgccctccttcgccattgagtctggcatggcgcaaatttggcagcggcaaa
gcggtagaagatattgtgaccttgtttacccagcgcaggccggaaatcagcggattttta
gaaattttcggcaacccacgcagttaa
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