Escherichia coli P12b: P12B_c0518
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Entry
P12B_c0518 CDS
T02030
Symbol
ybbU
Name
(GenBank) HTH-type transcriptional repressor allR
KO
K10973
IclR family transcriptional regulator, negative regulator of allantoin and glyoxylate utilization operons
Organism
elp
Escherichia coli P12b
Brite
KEGG Orthology (KO) [BR:
elp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
elp03000
]
P12B_c0518 (ybbU)
Transcription factors [BR:
elp03000
]
Prokaryotic type
Helix-turn-helix
IclR family
P12B_c0518 (ybbU)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
IclR_C
HTH_IclR
MarR_2
Motif
Other DBs
NCBI-ProteinID:
AFG39398
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All DBs
Position
553248..553964
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AA seq
238 aa
AA seq
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MEKSGGSSSVSDISLNLDLPLSTTFRLLKVLQAADFVYQDSQLGWWHIGLGVFNVGAAYI
HNRDVLSVAGPFMRRLMLLSGETVNVAIRNGNEAVLIGQLECKSMVRMCAPLGSRLPLHA
SGAGKALLYPLAEEELMSIILQTGLQQFTPTTLVDMPTLLKDLEQARELGYTVDKEEHVV
GLNCIASAIYDDVGSVVAAISISGPSSRLTEDRFVSQGELVRDTARDISTALGLKAHP
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
ttggaaaaaagtgggggaagttcgtcggttagcgatatttctctcaatctggatttgccg
ctctccacgacctttcgcttgctgaaggttttacaggcagcggattttgtctatcaggac
agtcaattaggctggtggcatataggattaggtgtctttaacgtcggtgcggcgtacatc
cataaccgcgatgtcctctccgtcgccgggccgtttatgcgccgcctgatgttactttcc
ggcgaaacggtcaatgtcgcgatccgtaacggcaatgaagcggtattaattggtcagtta
gagtgtaaatcgatggtcaggatgtgtgcgccactgggcagtcgtctgccactgcatgct
tccggtgcgggcaaagcgctgctttatccgctggcggaagaggagttgatgagcatcatt
ctgcaaaccggtttgcagcagtttacgccaactacgcttgtggatatgcccaccttgctg
aaggacctggaacaagcgcgtgaactgggctataccgtagataaagaagagcatgttgta
ggtctgaattgcatagcttcagcaatttacgatgatgtcggtagtgttgttgccgctatc
tccatctccgggccttcatcaagactgacagaagatcgttttgtcagtcagggtgagctg
gtcagagacaccgcccgcgatatcagcacggcgttgggactgaaagcacatccataa
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