Escherichia coli P12b: P12B_c0678
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Entry
P12B_c0678 CDS
T02030
Symbol
phrB
Name
(GenBank) Deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
elp
Escherichia coli P12b
Brite
KEGG Orthology (KO) [BR:
elp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
elp03400
]
P12B_c0678 (phrB)
Enzymes [BR:
elp01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
P12B_c0678 (phrB)
DNA repair and recombination proteins [BR:
elp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
P12B_c0678 (phrB)
Prokaryotic type
P12B_c0678 (phrB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
AFG39555
LinkDB
All DBs
Position
735944..737362
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AA seq
472 aa
AA seq
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MTTHLVWFRQDLRLHDNLALAAACRNSSARVLALYIATPRQWATHNMSPRQAELINAQLN
GLQIALAEKGIPLLFREVDDFVASVEIVKQVCAENSVTHLFYNYQYEVNERARDVEVERA
LRNVVCEGFDDSVILPPGAVMTGNHEMYKVFTPFKNAWLKRLREGMPECVAAPKVRSSGS
IEPSPSITLNYPRQSFDTAHFPVEEKAAIAQLRQFCQNGAGEYEQQRDFPAVEGTSRLSA
SLATGGLSPRQCLHRLLAEQPQALDGGAGSVWLNELIWREFYRHLITYHPSLCKHRPFIA
WTDRVQWQSNPAHLQAWQEGKTGYPIVDAAMRQLNSTGWMHNRLRMITASFLVKDLLIDW
REGERYFMSQLIDGDLAANNGGWQWAASTGTDAAPYFRIFNPTTQGEKFDHEGEFIRQWL
PELRDVPGKVVHEPWKWAQKAGVTLDYPQPIVEHKEARVQTLAAYEAARKGK
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgactacccatctggtctggtttcgccaggatttacgtctgcacgataatctcgcactg
gctgccgcctgccgcaattcgtctgcacgcgtgctggcgttgtatatcgctacaccacgc
cagtgggcgacgcataacatgtcgccgcgtcaggctgaacttatcaatgctcaactgaat
gggctacaaatagcgcttgcggaaaaaggtattcctttattgttccgtgaagtggatgac
tttgtcgccagtgtcgaaatagttaaacaggtgtgcgcggaaaacagcgttacccacctg
ttttataactatcagtatgaagtgaatgagcgggcgcgggatgtggaagttgaaagagcg
ctgcgtaacgtggtgtgtgaaggatttgatgacagcgtgatcctgccgcctggcgcggtg
atgaccggtaatcacgagatgtacaaagtctttacgccttttaagaatgcctggctgaaa
cggctgcgggaagggatgccggagtgcgtcgctgcgccaaaagttcgtagtagcggatcg
atagagccctcgccatccattacgctgaattatcctcgtcagtctttcgatactgcgcat
tttccggtggaagaaaaagcggcgattgcgcaattacgccagttttgccagaacggtgcc
ggagaatatgagcaacaacgagattttccggcagtggaaggcaccagccgtttgtcggcc
agcctggcaacgggcgggttatcgcctcgccagtgcttgcatcgcttgttggctgaacag
ccgcaggcgctggacggtggggccggtagtgtctggcttaatgagctgatctggcgcgag
ttttaccgtcacctgataacgtatcacccctcgttgtgtaaacatcgtccatttattgcc
tggacggatcgtgtacagtggcagagcaatcccgcacatttacaggcctggcaggaaggc
aaaacgggatacccgattgttgatgccgctatgcgtcagcttaacagcactggctggatg
cataacaggctacggatgattacagccagttttctggtgaaagatttattgatcgactgg
cgcgaaggcgagcgatatttcatgtcgcagctgattgatggtgatttggcagccaataac
ggtggctggcagtgggccgcttcaaccggaaccgatgcagcgccgtattttcgtattttc
aacccgacaacccagggcgagaaatttgatcatgagggcgagtttatccgccagtggcta
ccggaactgcgcgatgtgccagggaaagtggtgcatgagccgtggaagtgggcgcagaaa
gcaggtgtgacgctggattatccgcaaccgatagtcgagcacaaagaagcgagagtacaa
acgttggcagcgtatgaggcggcgcggaaggggaaataa
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