Escherichia coli P12b: P12B_c1642
Help
Entry
P12B_c1642 CDS
T02030
Symbol
ddpA
Name
(GenBank) putative D,D-dipeptide-binding periplasmic protein ddpA precursor
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
elp
Escherichia coli P12b
Pathway
elp02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
elp00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
P12B_c1642 (ddpA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
elp02000
]
P12B_c1642 (ddpA)
Transporters [BR:
elp02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
P12B_c1642 (ddpA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
OpuAC
Motif
Other DBs
NCBI-ProteinID:
AFG40500
LinkDB
All DBs
Position
1775952..1777412
Genome browser
AA seq
486 aa
AA seq
DB search
MLVIGKAADPQTLDPAVTIDNNDWTVTYPSYQRLVQYKTDGDKGSTDVEGDLASSWKASD
DQKEWTFTLKDNAKFADGTPVTAEAVKLSFERLLKIGQGPAEAFPKDLKIDAPDEHTVKF
TLSQPFAPFLYTLANDGASIINPAVLKEHAADDARGFLAQNTAGSGPFMLKSWQKGQQLV
LVPNPHYPGNKPNFKRVSVKIIGESASRRLQLSRGDIDIADALPVDQLNALKQENKVNVA
EYPSLRVTYLYLNNSKAPLNQADLRRAISWSTDYQGMVNGILSGNGKQMRGPIPEGMWGY
DATAMQYNHDETKAKAEWDKVTSKPTSLTFLYSDNDPNWEPIALATQSSLNKLGIIVKLE
KLANATMRDRVGKGDYDIAIGNWSPDFADPYMFMNYWFESDKKGLPGNRSFYENSEVDKL
LRNALATTDQTQRTRDYQQAQKIVIDDAAYVYLFQKNYQLAMNKEVKGFVFNPMLEQVFN
INTMSK
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgctggtgattggtaaggccgccgatccacaaaccctcgacccggcggtaacaatagat
aataacgactggacagtgacctacccgtcttatcagcggctggttcagtacaaaacggac
ggtgataaaggctcaaccgacgttgaaggcgatctggcaagtagctggaaagcgtctgac
gatcaaaaagagtggacgttcaccctgaaagataatgctaaatttgccgatggcacacct
gtcactgccgaagcagtaaaactttcttttgagcggctactaaaaatcggccaggggcca
gcagaagcatttcccaaagatttaaagattgatgctcccgacgaacatacggtgaagttt
acccttagccaaccattcgcaccgttcctctacacgctggcgaatgacggtgcatccatt
atcaatccggcggtcttaaaggaacatgcagcggatgatgctcgcggcttcctcgcgcaa
aataccgccggttccggaccatttatgctgaaaagctggcaaaaaggtcagcaattagtt
ctggtgccaaatccgcattacccaggcaataaaccgaacttcaaacgggtatcggtaaaa
attattggtgaaagtgcctcccgtcgcctgcagctctcccgtggcgacattgacattgcc
gatgcgctgccggtggatcaactcaacgccctgaagcaggaaaataaagtcaatgtggca
gagtatccgtcactgcgcgttacctatctgtatctgaataacagcaaagcgcctcttaat
caggcggatctgcgtcgggccatttcctggtctaccgattatcagggcatggttaacggc
attctgagtggtaacggaaaacagatgcgcggcccgattccggaaggcatgtggggctac
gatgcgacggcaatgcaatacaaccatgacgaaacgaaagccaaagccgaatgggataaa
gtgacgagcaaacccaccagcctgacgtttctctactccgataacgatccgaactgggag
cctattgctctggcgacacaatccagtctcaacaagctgggcatcattgtgaagctggaa
aagctggcgaacgccaccatgcgcgacagagtgggtaaaggtgattacgacattgcgatt
ggcaactggagtccggattttgccgacccgtatatgtttatgaattactggtttgagtca
gacaaaaaaggtctgccgggtaaccgctcgttctatgaaaacagtgaggtcgataagtta
ctgcgcaatgcgcttgcgaccaccgaccagacgcagcgtacccgggactaccagcaggca
cagaaaatcgtcattgatgacgctgcttatgtgtacctgttccagaaaaactaccaactg
gcgatgaacaaagaggtgaaaggctttgtgttcaatcccatgctggaacaggtcttcaat
atcaataccatgagtaaataa
DBGET
integrated database retrieval system
