Escherichia coli P12b: P12B_c2172
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Entry
P12B_c2172 CDS
T02030
Symbol
alkA
Name
(GenBank) 3-methyl-adenine DNA glycosylase II, inducible
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
elp
Escherichia coli P12b
Pathway
elp03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
elp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
P12B_c2172 (alkA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
elp03400
]
P12B_c2172 (alkA)
Enzymes [BR:
elp01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
P12B_c2172 (alkA)
DNA repair and recombination proteins [BR:
elp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
P12B_c2172 (alkA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
AFG41019
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All DBs
Position
complement(2338119..2338967)
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AA seq
282 aa
AA seq
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MYTLNWQPPYDWSWMLGFLAARAVSGVETVADDYYARSLAVGEYRGVVTAIPDIARHTLH
INLSAGLEPVAAECLAKMSRLLDLQCNPQIVNGALGKLGAARPGLRLPGCVDAFEQGVRA
ILGQLVSVAMAAKLTAKVVQLYGERLDDFPEYICFPTPQRLAAADPQALKALGMPLKRAE
ALIHLANAALEGTLPMTIPGDVEQAMKTLQTFPGIGRWTANYFALRGWQAKDVFLPDDYL
IKQRFPGMTPAQIRLYAERWKPWRSYALLHIWYTEGWQPDEA
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atgtataccctgaactggcagccgccgtatgactggtcgtggatgttgggatttctcgcc
gcccgtgcggtgagcggtgtggaaacggtcgcggacgattattatgcccgtagtctggcg
gtgggcgaatatcgcggcgtggtgactgctattccggatatagcccgccatactctgcac
ataaatttaagtgcaggtttagaacctgttgccgctgagtgtctggcgaaaatgagccgc
ctgcttgatctgcaatgtaacccgcagattgttaacggtgcgttgggcaagttaggcgcg
gcgcggcccggattgcgtttacccggctgtgttgatgcttttgagcagggtgtgcgggcg
attttaggccaactggtgagcgtggcgatggcggcaaaattgactgccaaagtggtacag
ctttatggcgaacggctggatgattttccggagtatatctgcttcccgacgcctcagcgg
ctggcagcagccgacccgcaggcattaaaagcgttaggtatgccgttgaaacgggcagag
gcgctgattcatctggcaaatgcggcgctggagggcaccttaccaatgacaataccgggc
gatgtggagcaggcgatgaaaacgctgcaaacttttccgggtatcgggcgctggacggcg
aattatttcgccttgcgcggctggcaggcgaaagatgtttttctgccggatgattatctg
attaaacagcgatttccggggatgacaccggcacaaatccgcctttatgccgaacgctgg
aagccctggcgttcttatgcgctgttgcatatctggtatacggaaggctggcaaccagac
gaagcatga
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