Escherichia coli P12b: P12B_c2677
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Entry
P12B_c2677 CDS
T02030
Symbol
srmB
Name
(GenBank) ATP-dependent RNA helicase SrmB
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
elp
Escherichia coli P12b
Brite
KEGG Orthology (KO) [BR:
elp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
elp03009
]
P12B_c2677 (srmB)
Enzymes [BR:
elp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
P12B_c2677 (srmB)
Ribosome biogenesis [BR:
elp03009
]
Prokaryotic type
rRNA helicases
P12B_c2677 (srmB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
AFG41519
LinkDB
All DBs
Position
2926129..2927463
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AA seq
444 aa
AA seq
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MTVTTFSELELDESLLEALQDKGFTRPTAIQAAAIPPALDGRDVLGSAPTGTGKTAAYLL
PALQHLLDFPRKKSGPPRILILTPTRELAMQVADHARELAKHTHLDIATITGGVAYMNHA
EVFSENQDIVVATTGRLLQYIKEENFDCRAVETLILDEADRMLDMGFAQDIEHIAGETRW
RKQTLLFSATLEGDAIQDFAERLLEDPVEVSANPSTRERKKIHQWYYRADDLEHKTALLV
HLLKQPEATRSIVFVRKRERVHELANWLREAGINNCYLEGEMVQGKRNEAIKRLTEGRVN
VLVATDVAARGIDIPDVSHVFNFDMPRSGDTYLHRIGRTARAGRKGTAISLVEAHDHLLL
GKVGRYIEEPIKARVIDELRPKTRAPSEKQTGKPSKKVLAKRAEKKKAKEKEKPRVKKRH
RDTKNIGKRRKPSGTGVPPQTTEE
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgactgtaacgactttttccgaacttgaactcgacgaaagcctgctggaagccctccag
gataaaggtttcactcgcccgaccgccattcaggctgccgccattccgcctgcgctcgat
ggccgtgatgtactcggttctgcgccgacaggcaccggtaaaacggcggcgtatctgctg
ccagcgttgcagcacctgctcgatttcccgcgtaagaaatccggtccgccgcgtattttg
atcctcaccccaactcgcgagctggcgatgcaggtggccgatcatgcccgcgaactggcg
aaacatacgcatctggatatcgccaccatcaccggcggcgtagcctatatgaaccacgcg
gaagtgttcagcgaaaatcaggacatcgtggtcgccacgaccggacgtctgctgcaatac
ataaaagaagagaacttcgattgccgcgcggttgaaacgctgatcctcgacgaagcagac
cgtatgctggatatgggcttcgctcaggatatcgaacatattgctggcgaaacgcgctgg
cgtaaacagaccctgctcttttcggcaacgctggaaggcgatgcgattcaggactttgcc
gagcgtctgctggaagatccggtggaagtttctgccaatccctccacccgtgagcgcaaa
aaaattcatcagtggtattaccgcgccgatgatcttgagcataaaaccgcgttgctggtg
catctgttaaaacagccggaagcgacccgctcaattgtgtttgtgcgtaagcgtgagcgt
gtgcatgagctggcaaactggctgcgcgaagcgggcatcaacaactgctatctcgaaggt
gagatggtacagggcaagcgtaacgaagcgatcaagcgtttgaccgaaggtcgcgtaaac
gtactggtcgcaaccgatgttgccgcgcgcggtatcgacattcctgacgtcagccacgtc
tttaacttcgatatgccgcgcagtggcgatacttatttgcaccgtatcggacgtaccgcg
cgcgccggtcgtaaaggcaccgcaatttcgctggtggaagcccatgaccatctgctgctg
ggtaaagtaggccgctatattgaagagccaattaaagctcgcgttattgatgagttacgc
ccgaaaacgcgtgcgccaagcgaaaagcagaccggcaagccatcgaagaaagtactggct
aaacgtgctgagaagaaaaaagctaaagagaaagagaagccgcgggtgaaaaaacgccat
cgcgacaccaaaaatattggtaagcgccgtaaaccaagcggaacgggcgtgccaccgcaa
acgacagaagagtaa
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