Escherichia coli P12b: P12B_c3522
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Entry
P12B_c3522 CDS
T02030
Symbol
rtcR
Name
(GenBank) Sigma54-dependent transcription regulator containing an AAA-type ATPase domain and a DNA-binding domain
KO
K14414
transcriptional regulatory protein RtcR
Organism
elp
Escherichia coli P12b
Brite
KEGG Orthology (KO) [BR:
elp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
elp03000
]
P12B_c3522 (rtcR)
Transcription factors [BR:
elp03000
]
Prokaryotic type
Other transcription factors
Others
P12B_c3522 (rtcR)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcR
Sigma54_activat
Sigma54_activ_2
AAA_5
AAA
Mg_chelatase
NACHT
AAA_16
AAA_22
AAA_30
AAA_7
AAA_33
AAA_19
AAA_2
AAA_14
T2SSE
ATPase_2
ResIII
TsaE
MCM
NPHP3_N
NB-ARC
Motif
Other DBs
NCBI-ProteinID:
AFG42342
LinkDB
All DBs
Position
3825841..3827439
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AA seq
532 aa
AA seq
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MRKTVAFGFVGTVLDYAGRGSQRWSKWLPTLCLCQQESLVIDRLELLHDARSRSLFETLK
RDIASVSPETEVVSVEIELHNPWDFEEVYACLHDFARGYEFQPEKEDYLIHITTGTHVAQ
ICWFLLAEARYLPARLIQSSPPRKKEQPRGAGEVTIIDLDLSRYNAIASRFAEERQQTLD
FLKSGIATRNPHFNRMIEQIEKVAIKSRAPILLNGPTGAGKSFLARRIFELKQARHQFSG
AFVEVNCATLRGDTAMSTLFGHVKGAFTGARESREGLLRSANGGMLFLDEIGELGADEQA
MLLKAIEEKTFYPFGSDRQVSSDFQLIAGTVRDLRQLVAEGKFREDLYARINLWTFTLPG
LRQRQEDIEPNLDYEVERHASLTGDSVRFNTEARRAWLAFATSPQATWRGNFRELSASVT
RMATFATSGRITLDVVEDEINRLRYNWQESRPSALTQLLGAEAENIDLFDRMQLEHVIAI
CRQAKSLSAAGRQLFDVSRQGKASVNDADRLRKYLARFGLTWEALQDQHSSS
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atgcgtaaaacagtggcttttggctttgtcggtaccgtgctggattatgccgggcgcggc
agtcagcgctggtcgaaatggcttccgacactctgtttatgccagcaagaatcgttggtc
atcgatcgactggaattattgcatgacgcccgctcgcgctcgctatttgaaacgcttaaa
cgcgatatcgccagcgtttcgccagaaacagaagtggtgagcgttgagattgaactgcat
aacccgtgggatttcgaagaggtttacgcttgcctgcatgatttcgcccgtggttacgag
tttcagccagaaaaagaagactatttaattcacattaccaccggcacccacgtcgcgcag
atttgctggtttctgctggcggaagcgcgttacctgcccgcccggctgatacaatcttca
cctccgcgcaaaaaagaacagccgcgcggcgcaggtgaagtgacgattatcgatctcgat
ttaagccgttataacgccatcgccagccgctttgccgaggaacgccagcaaacgcttgat
tttcttaagtccggcattgccacgcgtaacccccacttcaaccgcatgattgagcagatc
gaaaaagtggcgatcaaatcccgcgcgccgattctgcttaacggtccaaccggcgcgggc
aagtcatttctggcgcgacgcatcttcgagttaaaacaggcgcggcatcagtttagcggc
gcgtttgtggaagtgaactgcgccaccctgcgcggcgataccgccatgtcgacgctgttt
ggtcatgtaaaaggcgcgtttaccggggcgcgggaatctcgtgaaggtttattacgcagc
gccaacggcggaatgttgtttcttgatgagattggcgaactgggcgcagacgaacaagca
atgctgctaaaagccattgaagagaaaaccttttacccgtttggcagcgatcgccaggtg
agcagtgattttcagcttatcgccggaacggtgcgcgatttgcgccagctggttgccgaa
ggcaaattccgcgaagatctgtacgcgcggatcaatctctggaccttcaccctgccgggg
ctacgccagcgccaggaagatattgaacctaacctggattatgaagtggagcgccacgcc
tcactcaccggcgacagcgtgcgttttaacaccgaagcgcggcgtgcctggctggccttt
gcaacatctcctcaggcgacatggcgcggtaactttcgcgagctttctgccagcgtcacg
cggatggcaacctttgccactagcggacgcatcactctggacgtggttgaagatgagata
aaccgtctgcgctataactggcaggagagccgtccctccgcgcttacgcaactgctgggc
gcagaggcagaaaacatcgatctcttcgaccgtatgcaactggaacacgttatcgctatc
tgccgccaggcaaagtcgctttctgctgccggacgacagctttttgatgtttcgcgccag
ggcaaagccagcgtcaatgacgcggatcggctacgcaaatacctggcgcgttttggtctg
acctgggaagcattgcaggatcagcacagctccagttga
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