Escherichia coli P12b: P12B_c3981
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Entry
P12B_c3981 CDS
T02030
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
elp
Escherichia coli P12b
Pathway
elp03030
DNA replication
elp03410
Base excision repair
elp03420
Nucleotide excision repair
elp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
elp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
P12B_c3981 (polA)
03410 Base excision repair
P12B_c3981 (polA)
03420 Nucleotide excision repair
P12B_c3981 (polA)
03440 Homologous recombination
P12B_c3981 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
elp03032
]
P12B_c3981 (polA)
03400 DNA repair and recombination proteins [BR:
elp03400
]
P12B_c3981 (polA)
Enzymes [BR:
elp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
P12B_c3981 (polA)
DNA replication proteins [BR:
elp03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
P12B_c3981 (polA)
DNA repair and recombination proteins [BR:
elp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
P12B_c3981 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
P12B_c3981 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH
Prok-E2_E
HHH_5
Motif
Other DBs
NCBI-ProteinID:
AFG42797
LinkDB
All DBs
Position
4355201..4357873
Genome browser
AA seq
890 aa
AA seq
DB search
MYGVLNMLRSLIMQYKPTHAAVVFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAM
VKAMGLPLLAVSGVEADDVIGTLAREAEKAGRPVLISTGDKDMAQLVTPNITLINTMTNT
ILGPEEVVNKYGVPPELIIDFLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEP
EKIAGLSFRGAKTMAAKLEQNKEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGL
FKKYEFKRWTADVEAGKWLQAKGAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEET
LKAWIAKLEKAPVFAFDTETDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISR
ERALELLKPLLEDEKALKVGQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDM
DSLAERWLKHKTITFEEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQK
HKGPLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEF
NLSSTKQLQTILFEKQGIKPLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKS
TYTDKLPLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPED
YVIVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAK
AINFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETL
DGRRLYLPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIM
QVHDELVFEVHKDDVDAVAKQIHQLMENCTRLDVPLLVEVGSGENWDQAH
NT seq
2673 nt
NT seq
+upstream
nt +downstream
nt
atgtatggtgtcctcaacatgctgcgcagtctaatcatgcaatataaaccgacgcatgca
gcggtggtctttgacgccaagggaaaaacctttcgtgatgaactgtttgaacattacaaa
tcacatcgcccgccaatgccggacgatctgcgtgcacaaatcgaacccttgcacgcgatg
gttaaagcgatgggactgccgctgctggcggtttctggcgtagaagcggacgacgttatc
ggtactctggcgcgcgaagccgaaaaagccgggcgtccggtgctgatcagcactggcgat
aaagatatggcgcagctggtgacgccaaatattacgcttatcaataccatgacgaatacc
atcctcggaccggaagaggtggtgaataagtacggcgtgccgccagaactgatcatcgat
ttcctggcgctgatgggtgactcctctgataacattcctggcgtaccgggcgtcggtgaa
aaaaccgcgcaggcattgctgcaaggtcttggcggactggatacgctgtatgccgagcca
gaaaaaattgctgggttgagcttccgtggcgcgaaaacaatggcagcgaagctcgagcaa
aacaaagaagttgcttatctctcataccagctggcgacgattaaaaccgacgttgaactg
gagctgacctgtgaacaactggaagtgcagcaaccggcagcggaagagttgttggggctg
ttcaaaaagtatgagttcaaacgctggactgctgatgtcgaagcgggcaaatggttacag
gcaaaaggggcaaaaccagccgcgaagccacaggaaaccagtgttgcagacgaagcacca
gaagtgacggcaacggtgatttcttatgacaactacgtcaccatccttgatgaagaaaca
ctgaaagcgtggattgcgaagctggaaaaagcgccggtatttgcatttgataccgaaacc
gacagccttgataacatctctgctaacctggtcgggctttcttttgctatcgagccaggc
gtagcggcatatattccggttgctcatgattatcttgatgcgcccgatcaaatctctcgc
gagcgtgcactcgagttgctaaaaccgctgctggaagatgaaaaggcgctgaaggtcggg
caaaacctgaaatacgatcgcggtattctggcgaactacggcattgaactgcgtgggatt
gcgtttgataccatgctggagtcctacattctcaatagcgttgccgggcgtcacgatatg
gacagcctcgcggaacgttggttgaagcacaaaaccatcacttttgaagagattgctggt
aaaggcaaaaatcaactgacctttaaccagattgccctcgaagaagccggacgttacgcc
gccgaagatgcagatgtcaccttgcagttgcatctgaaaatgtggccggatctgcaaaaa
cacaaagggccgttgaacgtcttcgagaatatcgaaatgccgctggtgccggtgctttca
cgcattgaacgtaacggtgtgaagatcgatccgaaagtgctgcacaatcattctgaagag
ctcacccttcgtctggctgagctggaaaagaaagcgcatgaaattgcaggtgaggaattt
aacctttcttccaccaagcagttacaaaccattctctttgaaaaacagggcattaaaccg
ctgaagaaaacgccgggtggcgcgccgtcaacgtcggaagaggtactggaagaactggcg
ctggactatccgttgccaaaagtgattctggagtatcgtggtctggcgaagctgaaatcg
acctacaccgacaagctgccgctgatgatcaacccgaaaaccgggcgtgtgcatacctct
tatcaccaggcagtaactgcaacgggacgtttatcgtcaaccgatcctaacctgcaaaac
attccggtgcgtaacgaagaaggtcgtcgtatccgccaggcgtttattgcgccagaggat
tatgtgattgtctcagcggactactcgcagattgaactgcgcattatggcgcatctttcg
cgtgacaaaggcttgctgaccgcattcgcggaaggaaaagatatccaccgggcaacggcg
gcagaagtgtttggtttgccactggaaaccgtcaccagcgagcaacgccgtagcgcgaaa
gcgatcaactttggtctgatttatggcatgagtgctttcggtctggcgcggcaattgaac
attccacgtaaagaagcgcagaagtacatggacctttacttcgaacgctaccctggcgtg
ctggagtatatggaacgcacccgtgctcaggcgaaagagcagggctacgttgaaacgctg
gacggacgccgtctgtatctgccggatatcaaatccagcaatggtgctcgtcgtgcagcg
gctgaacgtgcagccattaacgcgccaatgcagggaaccgccgccgacattatcaaacgg
gcgatgattgccgttgatgcgtggttacaggctgagcaaccgcgtgtacgtatgatcatg
caggtacacgatgaactggtatttgaagttcataaagatgatgttgatgccgtcgcgaag
cagattcatcaactgatggaaaactgtacccgtctggatgtgccgttgctggtggaagtg
gggagtggcgaaaactgggatcaggcgcactaa
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