Erythrobacter litoralis DSM 8509: Ga0102493_111221
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Entry
Ga0102493_111221 CDS
T04740
Name
(GenBank) RNA polymerase sigma factor, FliA/WhiG family
KO
K02405
RNA polymerase sigma factor FliA
Organism
elq
Erythrobacter litoralis DSM 8509
Pathway
elq02020
Two-component system
elq02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
elq00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Ga0102493_111221
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Ga0102493_111221
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
elq03021
]
Ga0102493_111221
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
elq02035
]
Ga0102493_111221
Transcription machinery [BR:
elq03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Ga0102493_111221
Bacterial motility proteins [BR:
elq02035
]
Flagellar system
Flagellar assembly proteins
Stator
Ga0102493_111221
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
Rv2175c_wHTH
Motif
Other DBs
NCBI-ProteinID:
AOL22248
UniProt:
A0A074MZF6
LinkDB
All DBs
Position
complement(294588..295325)
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AA seq
245 aa
AA seq
DB search
MKHDPRAFAAKAYSATYASVSQDDVKRRVRQFLPLVRRSAWHIYGAGRDGLEVEDLMQAG
IVALTECAHRHSGPTEDGFAAYAKIRVRGAMLDQVRRNRHDSRLARRKRVRYEQTLEKLR
TELGREPDRGEVSKAMNLSDRELLDIEASGITISSISEEYDDGNVAFASEDPDPFELLCE
AEDRNLLVNAMAELPERLKLVLQLFFVEELNLTEIAAVLSVSVPRVHQLRAKALADLRTL
IEQIR
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atgaagcacgatccacgcgcatttgctgctaaagcctattctgccacctatgcttctgtt
tcgcaggatgacgtcaaacgccgcgtgcggcaatttttgccgcttgtccggcgatctgct
tggcacatctatggggccggtcgcgacggactcgaggtggaagatctaatgcaggctggc
atcgtggcacttaccgaatgcgcgcaccggcattccggaccgaccgaagacggtttcgca
gcatatgcgaaaattcgtgtccgtggggcgatgctcgatcaagtccggcgcaaccggcac
gacagtagattagccaggcgcaagcgcgttcgctacgagcaaaccctcgagaaattgcgt
acggagctgggacgcgaaccagatcgtggcgaagtttcaaaggctatgaacctgagcgat
cgcgaattgctcgatatcgaagcgtcaggcattacaatcagctcgatcagtgaggaatat
gatgatggcaacgtagcatttgcgagcgaggatcccgatccttttgaattgctctgcgag
gccgaggatcgtaacttattagtgaatgccatggccgagttgcctgaacggctcaaattg
gtccttcaattgttcttcgtcgaagaactaaatctcactgaaatcgcagccgtgcttagc
gtgagtgtgccgcgggtgcaccagcttcgggcaaaggcacttgccgatctaagaacgctt
attgaacagattcgttga
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