Erythrobacter litoralis DSM 8509: Ga0102493_111264
Help
Entry
Ga0102493_111264 CDS
T04740
Name
(GenBank) RNA polymerase sigma-54 factor
KO
K03092
RNA polymerase sigma-54 factor
Organism
elq
Erythrobacter litoralis DSM 8509
Pathway
elq02020
Two-component system
elq02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
elq00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Ga0102493_111264
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Ga0102493_111264
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
elq03021
]
Ga0102493_111264
Transcription machinery [BR:
elq03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Ga0102493_111264
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_IclR
Sigma70_r4
HTH_3
Arg_repressor
Motif
Other DBs
NCBI-ProteinID:
AOL22293
UniProt:
A0A074MVG6
LinkDB
All DBs
Position
complement(336425..337942)
Genome browser
AA seq
505 aa
AA seq
DB search
MALGPRLDLRQSQSLVMTPQLQQAIRLLAASNLELETYIGEALEANPLLDAGTTGTEERA
EPPEDGETPREERTSDLLMEAGEGEGDAPLDLDPAALDHDRETGDGAIAGAESGDWGGAV
SAPGSGSLEDYPDVEQLGAAEITLGEHLLSQVGASARDERQAFIARHIVGLLDDAGYLRF
DLEAIAYDLGADHTSVGEALDLVQSLDPSGVGARSLAECLAIQARDADRYDPCMAKLIDN
LDLLARGEIARLKRMCAVDEEDFADMLRELRGYDPKPGLAFAPSRVEGVVPDVLLSANGA
GGWDIAINEETLPRLVVNRSYYIEISAAASDASAQGWLKEKLADAHWLIRALDQRQKTIL
KTAAEIVRRQDGFFRRGVSELRPLTLREVAEKIDMHESTVSRVTSNKYLACDRGTFELKY
FFSSGVGRIGSSGESEGASSEAIKARIRALIDAEDPKKVLSDQKLVDLLNEEGFDLARRT
VAKYREAIGIGSSAQRRRAKKLEGL
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgggtccgcggcttgacctgaggcagtcgcaatcgctggtcatgacgccgcag
ctgcagcaggcgatcaggctgctagcggcatccaatctcgaactcgaaacctatatcggc
gaagcgctggaggcgaacccgctgctcgatgcggggacgacgggcacggaggaacgcgcc
gaaccgcccgaagacggcgaaaccccgcgcgaggaaaggaccagcgacctcctgatggaa
gcgggcgaaggcgaaggcgatgcgccgctcgatctcgatcccgcggcgctcgaccatgac
cgcgagacgggcgacggggcaatcgcgggcgccgaaagcggcgactggggcggcgcggtc
agcgccccgggctccggaagcctcgaggactatcccgatgtcgaacagcttggtgccgcc
gagatcacgctgggcgaacacctgctctcgcaggtaggcgcctcggcgcgcgacgagcgg
caggccttcatcgccaggcacatcgtcggcctgctggacgatgcgggctaccttcgcttc
gatctggaggcgatcgcctacgacctcggagccgaccacacgagcgtcggtgaagcgctc
gatctcgtccagtcactggacccttccggtgtgggcgcgcgcagccttgccgaatgcctc
gcgatccaggcacgcgacgccgaccgctacgatccgtgcatggccaagctgatcgacaac
ctcgacctgcttgctcgcggggagatcgcccggcttaagcgcatgtgcgcggtggacgag
gaggacttcgcggacatgctgcgcgaattgcgcggctacgatcccaagcccggcctcgcc
ttcgcgccgtcgcgtgtcgagggggtcgtgcccgacgtcctgttgagcgcgaacggcgcg
ggcggctgggacatcgcgatcaacgaggagaccctgccccgcctcgtcgtcaaccgatcc
tactacatcgaaatcagcgccgcagcctcggatgcatcggcccagggctggctcaaggag
aagctcgcggatgcgcactggctgatccgcgcgctcgatcagcggcagaagacgatcctc
aagaccgccgccgagatcgtccgacggcaggacggcttctttcgccgcggcgtttccgaa
ctgcggcccctgacccttcgcgaggtggccgagaagatcgatatgcacgagagcacggtc
agccgggtgaccagcaacaagtaccttgcctgcgatcgcggtaccttcgaactgaagtat
ttcttttccagcggggtcggacggatcggcagctctggcgagagcgaaggggcctcgtcg
gaagcgatcaaggcgcggatcagggcgctgatcgatgcggaggaccccaagaaggtcctc
tccgaccagaagctggtcgacctgctcaacgaagagggcttcgatctcgcccggcgcacg
gtagcgaaataccgcgaggcgatcggcattgggtcgagcgcgcaaaggcgccgggcgaag
aagctcgaagggttgtga
DBGET
integrated database retrieval system
