Erythrobacter litoralis DSM 8509: Ga0102493_111299
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Entry
Ga0102493_111299 CDS
T04740
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
elq
Erythrobacter litoralis DSM 8509
Pathway
elq03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
elq00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Ga0102493_111299 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
elq03021
]
Ga0102493_111299 (rpoC)
03400 DNA repair and recombination proteins [BR:
elq03400
]
Ga0102493_111299 (rpoC)
Enzymes [BR:
elq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Ga0102493_111299 (rpoC)
Transcription machinery [BR:
elq03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Ga0102493_111299 (rpoC)
DNA repair and recombination proteins [BR:
elq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Ga0102493_111299 (rpoC)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RPOC_hybrid
BSH_RND
Apocytochr_F_C
Peptidase_M23
YqfD
RRM_fung
Motif
Other DBs
NCBI-ProteinID:
AOL22327
UniProt:
A0A074MA64
LinkDB
All DBs
Position
376932..381218
Genome browser
AA seq
1428 aa
AA seq
DB search
MNELTKFTNQLAKPETFDQIQIGIASPERIRSWSFGEIKKPETINYRTFKPERDGLFCAR
IFGPVKDYECLCGKYKRMKYKGVVCEKCGVEVTVTKVRRERMGHIELAAPVAHIWFLKSL
PSRIGLLLDMQLKQLERVLYFESYVVVEPGLTPLEKFQLLTEDELLEAQDEYGEDAFSAN
IGAEAVKTMLMDLDLEQEREDLLEELATTKSALKPKKIIKRLKVVESFIESGNRPEWMIL
EVIPVIPPELRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLIELRAPDIIVRNEKRML
QEAVDALFDNGRRGRVITGANKRPLKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVTGP
ELKLHQCGLPKKMALELFKPFIYARLDAKGLSMTLKQAKKWVEKERKEVWDILDEVIREH
PVLLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCSAFNADFDGDQMAVHVPLSLEAQLE
ARVLMMSTNNILSPANGKPIIVPSQDMVLGLYYLSMERQEKTPEFIEEEDGSKIEKLPRF
SDMAEVHQALEVKSVTLHTRILARVPQADENGNVVMKRFVTTPGRMLIGECLPKNYKVPF
DIINRLLTKREIGDVIDQVYRHTGQKDTVLFADAIMSLGFRHAFKAGISFGKDDMIIPEA
KVKLVEETKDLVAGYEQQYQDGLITQQEKYNKVIDAWSRCGDQVAEAMMARIKAQPIDED
GREAEINSIYMMSHSGARGSPAQMKQLAGMRGLMAKPSGEIIENPIISNFKEGLNVLEYF
NSTHGARKGLADTALKTANSGYLTRRLVDVSQDCTIVETDCKTENALEMRAIVQGGSVIA
SLGERILGRTVAEDILNAATGEVIVKAGTLIDEPMVKDIEAAEVQSAKIRSPLVCEAEQG
VCATCYGRDLARGTPVNIGEAVGVIAAQSIGEPGTQLTMRTFHIGGAAQLNETSHLEAIS
DGRIELRDMPTITDKKGRILSLARNGEIAVIDAEGREREMHKVPYGTVLHFKHGEKVKVG
DRLAEWDPFTLPIITEYSGVVHYKDLIEGTTLEEQTDDATGIAQRVVTENRATGRKKKED
LRPRLTLLGEGQTDDGETEAQRYMLAPGTTLSVEDGQTVEAGDILARASREAAKTRDITG
GLPRVAELFEARLPKDNAIIAKISGKIEFVREYKAKRKIAIIPEEGDPVEYLIPKTKVID
VQEGDFVKKGDTLISGSPNPHDILEVLGVEALAEYLVNEIQEVYRLQGVKINDKHIEVIV
RQMLQKVEITDGGDTTLLPGEQVDLAEMLEINGRLPKGKQPAEGKPVLLGITKASLQTRS
FISAASFQETTRVLTQASVEGKKDTLIGLKENVIVGRLIPAGTGAAMNRMRVTASSRDAA
LKAQWKKQQEALAAANAVEQEPEADAVPSEEAMKAAMGGGNAEASTEE
NT seq
4287 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaactgaccaaattcaccaaccagctcgcgaagccggaaaccttcgaccagatc
cagatcggcatcgcttcgcctgagcgcatccgcagctggtcgttcggcgagatcaagaag
ccggaaaccatcaactaccgcacgttcaagcccgagcgtgacgggttgttctgcgcgcgc
atcttcggcccggtgaaggactacgagtgcctgtgcggcaagtacaagcgcatgaaatac
aagggcgtcgtctgcgaaaagtgcggcgtcgaagtcaccgtcaccaaggtccgccgtgag
cgcatgggccacatcgaactggccgcgccggtcgcgcatatctggttcctgaagtcgctg
ccgagccgcatcggcctgctgctcgacatgcagttgaagcagctcgagcgcgtgctctat
ttcgaaagctatgtcgtggtcgagccgggcctcaccccgcttgagaagttccagcttctg
accgaggacgagctgctcgaggcgcaggacgaatatggcgaggacgctttctcggccaat
atcggcgccgaggcggtcaagaccatgctgatggatctcgaccttgaacaggagcgcgag
gatcttctggaagaactcgccacaaccaagtcggcactcaagcctaagaagatcatcaag
cggctcaaggtcgtcgagagcttcatcgaatcgggcaaccgtcccgaatggatgatcctc
gaagtgatcccggtcattccgccggaactgcgcccgctcgtcccgctcgacggtggccgt
ttcgcgacctcggacctcaatgatctctatcgccgcgtgatcaaccgcaacaaccgcctg
aagcgcctgatcgaactgcgcgcgcccgacatcatcgtgcgcaacgaaaagcgcatgctg
caggaagcggtcgacgcgctgttcgacaacggccgccgcggccgggtcatcaccggcgcc
aacaagcgtccgctcaagtcgctgtccgacatgctcaagggcaagcagggccggttccgc
cagaacctgctcggcaagcgtgtcgattattcgggccgttcggtcatcgttaccgggccg
gaactcaagctgcaccagtgcggcctgcccaagaagatggcgctcgaactgttcaagccg
ttcatctacgcccgccttgatgccaagggtctgtcgatgaccctcaagcaggcgaagaag
tgggtcgagaaggagcgcaaggaagtctgggacatcctcgacgaggtgatccgcgaacac
cccgtgctcctgaaccgcgcgccgacgctccaccgcctcggcatccaggcgttcgaaccc
gtgctgatcgagggtaaggcgatccagcttcacccgctcgtctgctcggcgttcaatgcg
gacttcgacggcgaccagatggcggtccacgtgccgctttcgctggaggcccagctcgag
gcgcgcgtactcatgatgagcaccaacaacatcctctcgcccgccaatggcaagcctatc
atcgtgccctcgcaggacatggtgctggggctctattacctgtcgatggaacggcaggag
aagacgcccgaattcatcgaggaagaggacgggtcgaagatagagaagctgccgcgcttc
tctgacatggccgaagtgcaccaggcgctcgaggtcaagtcggtgacgctgcacacccgt
atcctcgcccgcgtgccgcaggctgacgagaacggcaacgtggtgatgaagcgtttcgtc
acgacccccggccggatgctgatcggcgaatgcctgccgaagaactacaaggttcccttc
gacatcatcaaccggctgctgaccaagcgcgagatcggtgacgtgatcgaccaagtctat
cgtcacaccggccagaaggacacggtgctgttcgccgacgcgatcatgagccttggcttc
cgccacgcgttcaaggcggggatcagcttcggcaaggacgacatgatcatccccgaagcg
aaggtgaagctggtcgaggagaccaaggatctcgtcgcgggctacgaacagcagtaccag
gacggcctcatcacccagcaggaaaaatacaacaaggtgatcgacgcctggagccgctgc
ggcgaccaggtggcagaggcaatgatggcgcggatcaaggcccagccgatcgacgaggac
gggcgcgaggccgagatcaattcgatctacatgatgagccactcgggcgcgcgcggttcg
cccgcccagatgaagcagctcgccgggatgcgcggcctcatggccaagccgtcgggcgag
atcatcgagaacccgatcatctcgaacttcaaggaaggtctcaacgtccttgaatacttc
aactcgacccacggtgcccgcaagggtcttgcggacacggcgctcaagacggcgaactcg
ggctacctgacccgccgcctcgttgacgtgtcgcaggactgcacgatcgtggagaccgac
tgcaagaccgagaacgcgctcgagatgcgcgcgatcgtccagggcggcagcgtgatcgcc
tcgctcggcgagcgcatcctcggccgcaccgtcgcagaggacatcctcaacgccgccacc
ggcgaagtgatcgtcaaggccggcacgctcatcgacgagccgatggtcaaggacatcgag
gccgccgaagtgcagtcggccaagatccgttcgccgctggtctgcgaagcggagcagggc
gtgtgcgcgacctgttacgggcgcgaccttgcccgcggcacgccggtcaatatcggcgaa
gcggtaggcgtgatcgcggcgcagtcgatcggcgaaccgggcacgcagctgaccatgcgg
accttccacatcggcggcgcggcgcagctcaacgagacgagccatctcgaggcgatctcg
gacggccgcatcgaactgcgcgacatgccgaccatcaccgacaagaagggtcgcatcctc
agccttgcacgtaatggcgagatcgccgtgatcgacgccgaagggcgcgagcgtgaaatg
cacaaggtgccttacgggaccgtgctgcacttcaagcatggcgaaaaggtcaaggtgggc
gaccgtctggccgagtgggacccgttcaccctgccgatcatcaccgaatattcgggcgtg
gtccattacaaggacctgatcgaggggacgacgctcgaggagcagaccgacgacgcgacc
ggcatcgcccagcgcgtggtcacagagaaccgggcgaccggacgcaagaagaaggaagat
cttcgcccgcgcctgaccctgctcggcgaaggccagaccgacgatggcgagaccgaggcg
cagcgttacatgctggccccgggcacgacgctttcggtcgaggacggccagacggtcgag
gcgggcgacatcctcgcccgtgcgagccgcgaggctgccaagacgcgcgacatcaccggc
ggtctgccgcgggtggctgagctgttcgaggcgcgcctgcccaaggacaacgcgatcatc
gccaagatttcgggcaagatcgaattcgtccgcgaatacaaggccaagcgcaagatcgcg
atcatcccggaagagggcgatccggtggaatacctgatccccaagaccaaggtgatcgac
gtgcaggaaggcgacttcgtgaagaagggggataccttgatttccggttcgcccaacccg
catgacatcctggaagtgctcggcgtcgaggcgctggccgaatatctcgtcaacgagatc
caggaggtctatcgactgcagggtgtgaagatcaacgacaagcacatcgaggtgatcgtt
cgccagatgctgcagaaggtcgagatcaccgacggcggcgacacgacactgctgccgggc
gaacaggtcgaccttgccgagatgctcgagatcaacggcaggcttcccaagggcaagcag
cccgcagaaggcaagccggtcctgctcggcatcaccaaagcgtcgctgcagacccgcagc
ttcatctcggcggcctccttccaggagacgacccgcgtgcttacccaggcttcggtcgag
ggcaagaaggacacgctgatcgggctcaaggagaacgtgatcgtgggccgtctcatcccc
gccggcaccggcgcggcgatgaaccggatgcgcgtcaccgcatccagccgcgatgccgcg
ctcaaggcgcaatggaagaagcagcaggaagcgctcgccgcggccaatgcggtcgagcaa
gagcccgaggccgatgcggttccctccgaggaagcgatgaaggccgcgatgggcggcggc
aatgcggaggcttccacggaagagtaa
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integrated database retrieval system
