Erythrobacter litoralis DSM 8509: Ga0102493_111428
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Entry
Ga0102493_111428 CDS
T04740
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
elq
Erythrobacter litoralis DSM 8509
Pathway
elq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
elq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Ga0102493_111428
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
elq03019
]
Ga0102493_111428
03400 DNA repair and recombination proteins [BR:
elq03400
]
Ga0102493_111428
Enzymes [BR:
elq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Ga0102493_111428
Messenger RNA biogenesis [BR:
elq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Ga0102493_111428
DNA repair and recombination proteins [BR:
elq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Ga0102493_111428
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
HRDC
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
Motif
Other DBs
NCBI-ProteinID:
AOL22456
UniProt:
A0A074MBV7
LinkDB
All DBs
Position
517220..519001
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AA seq
593 aa
AA seq
DB search
MSRVAAADVHDILRRTFGFSGFRGQQEAVVTRVLAGLPTLALMPTGAGKSLCYQLPALAL
DGTAIVISPLIALMHDQIRAADALGIRAASMTSADADNAATAEALRAGELDLLYVAPERA
TTPGFEALLAQARLSLFAIDEAHCVSEWGHDFRPDYRMLRPVLDRFPDIPRLALTATADE
VTRSDVLRQLGIPEDGLIVAGFDRPNIRYAIHPRGNAGQQVADFVKRTSGAGIVYATSRA
ATEQIAQHIAKTGRPTSFYHAGLPPERRSAVQAQFVGSEDMVMVATIAFGMGIDKPDVRF
VVHAGLPKSIEAYYQETGRAGRDGDPAEAALLWSPNDFARARQRLSEVEEHRLASERARL
DALAGLVETPGCRRAILLKHFGEDPPLACGNCDNCDNPPKVVDTTELARKLLSAVYRTGQ
SFGMGHVEKVLLGREDDRVRQRGHDSLSVYGIVGEDEAPLLRPLMRSLTAHGMLVTTEHG
GLALGPSARAVLKGERPVAIAEPPAKKRRKARTQAANPIGDPLFDALRAKRKELASERGV
PAYVIFHDSVLRDMATHRPETLRELGELQGVGAKKLETYGAEFIAVIRESFSA
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atgagccgggtcgccgcggcggacgtccacgacatcctgcgccgcactttcggcttttcc
ggctttcgcgggcagcaggaggcggtcgtcacccgcgtactcgcggggctgccgacgctc
gccctgatgccgacgggggcgggcaagtcgctctgctatcagctccccgcgctcgcgctc
gacggcacggccatcgtcatttcgcccctgatcgcgctgatgcacgaccagatccgcgcc
gccgatgcgctcggcatccgcgccgcctctatgacctcggccgatgccgacaacgccgcg
accgccgaggcgctgcgggccggcgaactcgacctcctctatgtcgcgcctgaacgtgcc
accacgcccggtttcgaagcgcttctggcgcaggcgcggctgtcgctcttcgcgatcgac
gaggcgcattgcgtgtccgaatgggggcacgatttccggcccgattaccggatgctgcgc
cccgtgctcgaccgatttcccgatatcccgcgtctcgcgctcaccgcgactgcggacgaa
gtgacgcgcagcgacgtgctgcgccagctcggcatacccgaagacggcctgatcgtcgcc
ggcttcgatcggcccaacatccgctatgccatccatccgcgcggcaatgcgggccagcag
gtcgccgatttcgtgaaacgcacgagcggggcggggatcgtctacgccaccagccgcgcc
gcgaccgagcagatcgcgcagcatatcgcgaagacgggtcgcccgaccagcttctaccat
gccggcctgccccctgagcggcgcagcgcggtgcaggcccaattcgtcggctcggaggac
atggtgatggtcgcgaccatcgccttcggcatggggatcgacaagcccgacgtgcgcttc
gtcgtccatgcgggcctccccaaatcgatcgaagcctattaccaggaaaccggccgcgcc
gggcgcgacggggacccggcggaagccgcgctgctgtggagccccaacgatttcgcccgc
gcccgccagcgcctgtccgaggttgaggagcatcgcctcgccagcgagcgcgcccggctc
gacgcccttgccgggctggtcgagacaccgggctgccgccgcgcgatcctcctgaagcat
ttcggcgaggatccgcccctagcctgcggcaattgcgacaattgcgacaacccgcccaag
gtcgtcgatacgaccgagctcgcgcgcaagctgctttctgcggtgtaccgcaccgggcag
agcttcggcatgggccatgtcgagaaggtcctgctcggccgcgaggatgatcgcgtgcgc
cagcgcgggcatgacagtctgtccgtctacggcatcgtcggcgaagacgaggcgccgctg
ctgcgcccgctgatgcgcagcctcacggcgcacggcatgctggtgacgaccgaacatggc
ggcctcgcgctgggaccgtcggcgcgcgcggtgctcaagggcgagcggccggtcgccatt
gccgaacccccggcgaagaagcgccgcaaagcccgcacgcaggcggcgaacccgatcggc
gatccgctgttcgacgcgctgcgcgccaagcgcaaggagctggcgagcgagcggggcgtg
cccgcctatgtcatcttccacgacagcgtgctgcgcgacatggcgacgcaccggcccgaa
acgctgcgcgaactgggcgaattgcagggcgtgggcgccaagaaactggagacctacggg
gccgaattcatcgccgtcatccgcgaatccttcagcgcctga
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