Erythrobacter litoralis DSM 8509: Ga0102493_112766
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Entry
Ga0102493_112766 CDS
T04740
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
elq
Erythrobacter litoralis DSM 8509
Pathway
elq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
elq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Ga0102493_112766
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
elq03019
]
Ga0102493_112766
Enzymes [BR:
elq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Ga0102493_112766
Messenger RNA biogenesis [BR:
elq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Ga0102493_112766
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Utp25_C
ERCC3_RAD25_C
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AOL23771
UniProt:
A0A074MZ91
LinkDB
All DBs
Position
complement(1885936..1887402)
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AA seq
488 aa
AA seq
DB search
MTRFSDLGLSQPVLQALELKGYDVPTPIQAQAIPPVLAGRDLLGIAQTGTGKTAAFMLPS
IDRLRASDNRIPFKSCRMLVLAPTRELAVQISASAKDYGALAGLKVQVIVGGTSVNKDRN
KLHRGTDILVATPGRLLDLIDQNAFNLSGVEVLVLDEADQMLDLGFIHALRKIRDLVPKE
RQTLFFSATMPKAIKELVNGYCTNPVQVSVTPESSTAERIDQYLFMVQQDEKQSLLEMIL
SGRHEVPGKTERVLIFARTKHGADRVVKRLSQRGIAANAIHGNKSQGQRQRALDEFRSGR
TQILVATDVAARGIDIPGVSHVINYELPNVPEQYVHRIGRTARAGRDGIAIAFCAEDERA
YLKDITRTTDAEFERLPLPDNFRAVVEGVGPVKPPVRGATRVSQKKVKPRPAGASKRPER
QGGEETRSKPKHPARKGRPNRSGGERSGGQSGQRSGGQGGQGGQGAGGQRRRRGPRRAGA
GGGGGPRG
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgacacgattttcagacctcgggctttcccagcccgttcttcaggcgctcgagctcaag
ggctacgacgtgccgaccccgatccaggcgcaggcgatcccgccagtgctcgcggggcgc
gacctgctcggcatcgcacagaccggcaccggcaagacggcggccttcatgctgccctcg
atcgaccggttgcgcgccagcgacaaccgcattcccttcaagagctgccgcatgctggtg
ctcgccccgacccgcgaactcgcggtgcagatctccgcgagcgccaaggattacggcgcg
ctcgccgggctcaaggtgcaggtcatcgtcggcggaaccagcgtcaacaaggaccgcaac
aagctccaccgcggcaccgatatcctcgtcgcgacgccgggccgcctgctcgatctcatc
gaccagaacgccttcaacctttcgggcgtcgaagtgctcgttctcgacgaagcggaccag
atgctcgacctcggcttcatccatgcgcttcgcaagatccgcgatctggtgcccaaggag
cgccagacgctgttcttcagcgcgaccatgcccaaggcgatcaaggagctggtgaacggc
tattgcaccaatccggtgcaggtgtcggtaacgcccgaaagctcgaccgccgagcggatc
gaccagtatctcttcatggtccagcaggacgaaaagcagtcgctgctcgagatgatcctg
tcgggccgtcacgaggttccgggcaagaccgaacgcgtgctgatcttcgcccgtaccaag
cacggggccgaccgcgtcgtgaagcggctgtcgcagcgcggcatcgcggcgaacgcgatc
cacggcaacaagtcgcagggccagcgtcagcgcgcgcttgacgaattccgctctgggcgc
acccagatcctggtcgcgaccgatgtggctgcgcgcgggatcgacattccgggcgtctcg
cacgtcatcaattacgaactcccgaacgtacccgaacaatatgtccaccgcatcggccgc
accgcacgggccgggcgtgacgggatcgcgatcgcgttctgcgccgaggacgagcgcgcc
tatttgaaggacataacccgcacgaccgatgcggaattcgagcgcctacctctgccggac
aatttccgcgccgtggtcgagggtgtcggcccggtgaagccgcccgtgcgcggcgctacg
cgggtctcgcagaaaaaggtcaagccgcgtcctgcgggcgcatcgaagcgtcccgaaagg
cagggcggcgaggaaacccgttccaagccgaagcatcccgcccgcaaggggcggcccaat
cgctccggcggtgaacgttccggcggtcagtcgggccagcgttccggcggtcagggcggt
cagggcggtcagggcgcgggcggccagcgccgtcgtcgcggtccgcgccgggccggtgct
ggcgggggcggcggcccgcgcggctag
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