Erythrobacter litoralis DSM 8509: Ga0102493_11785
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Entry
Ga0102493_11785 CDS
T04740
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
elq
Erythrobacter litoralis DSM 8509
Brite
KEGG Orthology (KO) [BR:
elq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
elq03016
]
Ga0102493_11785
Enzymes [BR:
elq01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
Ga0102493_11785
Transfer RNA biogenesis [BR:
elq03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
Ga0102493_11785
BRITE hierarchy
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Paralog
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Motif
Pfam:
DNA_pol_A_exo1
RNase_H_2
DUF4070
Motif
Other DBs
NCBI-ProteinID:
AOL24914
UniProt:
A0A074MSF3
LinkDB
All DBs
Position
3109641..3110261
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AA seq
206 aa
AA seq
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MTVHFHEEDLPPGVLAGTGALAVDTETMGLVTHRDRLCLVQISDGSSDEHLVRFAPGSDY
AAPNLKSVLADPARLKLYHYARFDLAALHYYLGVMAAPVFCTKIASKLTRTYTDRHGLKN
LTDELLGESISKQQQSSDWGGPELSEAQRDYAASDVRFLHRLQDELTKRLEREGRMEIAQ
ACFDFLPTRALLDIAGWAEHDIFSHS
NT seq
621 nt
NT seq
+upstream
nt +downstream
nt
atgacagtgcatttccacgaagaagacctgccccccggcgtgctcgccgggaccggcgcg
ctcgccgtcgataccgagacgatgggccttgtcacccaccgcgaccggctgtgcctcgtt
cagatttccgacgggtcgagcgatgaacatctcgtccggttcgctccgggcagcgattac
gccgcgcccaatctcaaatcggtgctggccgaccccgctcggctcaagctctaccattac
gcccgtttcgaccttgccgcgctgcattactatctcggcgtgatggccgcgcccgtgttc
tgcaccaagatcgcgagcaagctcacgcgcacctataccgaccgccacgggctcaagaac
ctgactgacgaactgcttggcgaaagcatttccaagcagcagcagagttccgactggggc
gggcccgaactgagcgaggcgcagcgcgactacgccgcctcggacgtgcgtttcctccac
cggctgcaggacgaactgacgaagcggctggagcgcgaggggcgcatggagatcgcgcag
gcctgtttcgacttcctccccacccgcgccctgctcgacatcgccggatgggccgagcac
gacatcttcagccacagctga
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