Escherichia coli O55 H7 RM12579 (EPEC): ECO55CA74_08255
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Entry
ECO55CA74_08255 CDS
T02066
Name
(GenBank) ATP-dependent RNA helicase DbpA
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
elr
Escherichia coli O55:H7 RM12579 (EPEC)
Brite
KEGG Orthology (KO) [BR:
elr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
elr03009
]
ECO55CA74_08255
Enzymes [BR:
elr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
ECO55CA74_08255
Ribosome biogenesis [BR:
elr03009
]
Prokaryotic type
rRNA helicases
ECO55CA74_08255
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
AEZ40245
LinkDB
All DBs
Position
1721930..1723303
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AA seq
457 aa
AA seq
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MTAFSTLNVLPPAQLTNLNELGYLTMTPVQAAALPAILAGKDVRVQAKTGSGKTAAFGLG
LLQQIDASLFQTQALVLCPTRELADQVAGELRRLARFLPNTKILTLCGGQPFGMQRDSLQ
HAPHIIVATPGRLLDHLQKGTVSLDALNTLVMDEADRMLDMGFSDAIDDVIRFAPASRQT
LLFSATWPEAIAAISGRVQRDPLAIEIDSTDALPPIEQQFYETSSKGKIPLLQRLLSLHQ
PSSCVVFCNTKKDCQAVCDALNEVGQSALSLHGDLEQRDRDQTLVRFANGSARVLVATDV
AARGLDIKSLELVVNFELAWDPEVHVHRIGRTARAGNSGLAISFCAPEEAQRANIISDML
QIKLNWQTPPANSSIVTLEAEMATLCIDGGKKAKMRPGDVLGALTGDIGLDGADIGKIAV
HPAHVYVAVRQAVAHKAWKQLQGGKIKGKTCRVRLLK
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgctttttctaccctgaatgttttgcctcccgcccaactcacgaaccttaatgag
ttgggttatttaaccatgacgccggtgcaggccgccgcgcttccggcgatccttgccgga
aaagatgttcgcgtgcaggcgaaaactggcagcggcaaaacggcggcttttggcctcggc
ttgttacagcaaattgatgcgtcgctatttcaaacccaggctttagtgctgtgtcctacg
cgtgaactggcggatcaggtggcaggtgaattgcgtcggctggcgcgttttctgccaaat
accaaaattttgacgttgtgcggtggtcaaccgttcggtatgcagcgtgattcgttgcaa
catgcgccgcatattatcgtggcaacgccgggccgtttgctggatcacctgcaaaaaggc
acggtatcactggatgcgctgaatactttggtgatggatgaggccgaccgcatgctggat
atgggatttagcgatgccattgatgatgtcatccgttttgcgcctgcatctcgacagacg
cttctgttttcggcaacctggccggaagccatcgccgcaatcagcggacgagtgcaacgc
gatcctttggcgattgaaattgactcaacagatgctttgccacccattgaacaacaattt
tatgagacatccagcaaaggcaaaattcctctgttgcaacggttattaagcttgcatcag
ccatcctcttgcgtggtgttttgcaataccaaaaaagattgccaggctgtctgcgacgcg
ctgaatgaagtagggcaaagtgcattgtcattacacggcgatctggagcaacgcgatcgt
gatcagaccctggtacgttttgctaacggtagcgcccgtgtactggtcgcgactgatgtt
gctgcgcgtggtctggatattaaatcgcttgagctggtggtgaactttgagctggcgtgg
gaccctgaagttcatgtacatcgcatcggtcgtacagctcgtgcaggaaatagcggtctg
gcgatcagtttctgtgctccggaagaagcacagcgggccaatatcatttctgacatgttg
cagataaaacttaactggcaaacgccaccagctaatagttccattgtgacgctggaagca
gaaatggcaacgttgtgtatcgatggcgggaaaaaagccaaaatgcgcccgggtgatgta
ttaggtgcactgacaggagatatcgggcttgatggcgcagatattggcaaaatcgccgtg
catccggcgcatgtctatgtcgcggtccgtcaggctgttgctcataaagcatggaaacag
ttacagggcgggaagattaaaggaaaaacgtgccgggtgcggttattaaaataa
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