KEGG   Escherichia coli O55 H7 RM12579 (EPEC): ECO55CA74_10065
Entry
ECO55CA74_10065   CDS       T02066                                 
Name
(GenBank) putative ATP-dependent helicase Lhr
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
elr  Escherichia coli O55:H7 RM12579 (EPEC)
Brite
KEGG Orthology (KO) [BR:elr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:elr03400]
    ECO55CA74_10065
Enzymes [BR:elr01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     ECO55CA74_10065
    5.6.2.6  RNA 3'-5' helicase
     ECO55CA74_10065
DNA repair and recombination proteins [BR:elr03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    ECO55CA74_10065
SSDB
Motif
Pfam: DEAD_assoc WH_Lhr DEAD WH4_Lhr WH3_Lhr WH2_Lhr Helicase_C ResIII HTH_20 MCM4_WHD Cas3-like_C_2 DDRGK
Other DBs
NCBI-ProteinID: AEZ40599
LinkDB
Position
2080757..2085373
AA seq 1538 aa
MADNPNPSSPLPDVFSPATRDWFLRAFKQPTAVQSQTWHVAARGEHALVIAPTGSGKTLA
AFLYALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKSIADERRRRG
ETEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRARETLRGVETVIIDE
VHAVAGSKRGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPA
MRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTN
SRGLAEKLTARLNELYAARLQRSPSIAADAAHFESTSGATSNRVQSSDVFIARSHHGSVS
KEQRAITEQALKSGELRCVVATSSLELGIDMGAVELVIQVATPLSVASGLQRIGRAGHQV
GGISKGLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQHTVAAAAMDALQVD
EWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQL
LAVTSGGTIPDRGMYSVLLPEGEEQAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQI
TRDQVIVTPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLADGAFFSGTIPPWLAEEN
TIANIQGLIDEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWALAIAGR
IHALWGADASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAARF
RECAARALLMPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPAILETLRECLQDVYDLPA
LERLMRRLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRASVLSLDSEL
LRNLLGQVDPGELLDPQVIRQVEEELQRLAPGRRAKGEEGLFDLLRELGPMTVEDLAQRH
TGSSEEIASYLENLLTVKRIFPTMISGQERLACMDDAARLRDALGVRLPESLPEIYLHRV
SYPLRDLFLRYLRAHALVTAEQLAHEFSLGIAIVEEQLQQLREQGLVMNLQQDIWVSDEV
FRRLRLRSLQAAREATRPVAATTYARLLLERQGVLPATDGSPALFASTSPGVYEGVDGVM
RVIEQLAGVGLPASLWESQILPARVHDYSPEVLDELLATGAVIWSEQKKLGEDDGLVALH
LQEYAAESFTPAEADQANRSALQQAIVAVLADGGAWFAQQISQRIRDKIGESVDPSALQE
ALWALVWQGVITSDIWAPLRALTRSSSNARTSTRRSHRARRGRPVYAQPVSPRVSYNTPN
LAGRWSLLQVEPLNDTERMLALAENMLDRYGIISRQAVIAENIPGGFPSMQTLCRSMEDS
GRIMRGRFVEGLGGAQFAERLTIDRLRDLATQAAQTRHYTPVALSANDPANVWGNLLPWP
AHPATLVPTRRAGALVVVSGGKLLLYLAQGGKKMLVWQEKEELLAPEVFHALTTALRREP
RLRFTLTEVNDLPVWQTPMFTLLREAGFSSSPQGLDWG
NT seq 4617 nt   +upstreamnt  +downstreamnt
atggcagataatccaaacccttcatcgcccctgccggacgtgttttcaccggcgacccgc
gactggtttcttcgcgcctttaaacagccgaccgctgtccagtcgcaaacctggcatgtg
gcggcgcgaggcgaacatgcgctggtgattgcaccgactggctccgggaaaacgctggca
gcatttctctacgccctcgatcgactcttccgcgaaggcggcgaagatacccgcgaggcg
cataaacgtaaaacctcacgcatcctctatatttcaccgataaaagccctgggcaccgac
gttcagcgcaacttgcagatcccgttgaagagtattgccgatgaacggcggcggcgcggc
gaaacggaagtcaatcttcgcgtggggatccgtactggcgatacgcctgcacaggaacgc
agcaaactcacccgtaatccgccggatattctgatcaccacacccgaatcactctatctg
atgctgacctcccgcgcgcgcgaaacgctacgcggcgtcgaaacggtaattattgatgaa
gtccacgcggtagcgggcagtaaacgtggtgcgcatctggcgttaagtctggagcggctc
gatgcgctgctccacacctcagcacagcgaattggcctttctgccactgtgcgctcagcc
agcgatgtggcagcatttcttggtggcgatcgcccggttacggtagtcaacccgcccgca
atgcgtcatccgcagatacggattgtcgtaccagtcgccaatatggatgatgtctcatcg
gtcgccagcggcactggcgaagacagccatgccggccgggaaggctccatctggccatat
attgaaacgggtatccttgatgaagtgttgcgccatcgctcgaccattgtctttactaat
tcgcgggggctggcggaaaaactgacggcacgattaaatgagctttacgccgcacgctta
cagcgttccccgtctatcgccgctgatgcggcccatttcgagtcgacctctggcgcaacc
tctaaccgtgtacaaagtagcgacgtttttattgcccgctcacaccacggctccgtctct
aaagaacaacgagcaatcaccgagcaggcgctgaaatcgggtgagttacgctgcgtggtc
gcaacttccagtctcgaactggggattgatatgggcgctgtggagctggtgattcaggtg
gcaacgccgctttctgttgccagtgggttacaacgcattggacgtgccggacaccaggta
ggaggtatctccaaagggctttttttcccccgaaccaggcgtgacttagtcgattccgca
gtcattgtagagtgtatgttcgcaggcaggctggaaaacctgacacctccgcataatcca
ctcgacgtccttgcgcagcacaccgttgccgccgcggcgatggatgcattacaggtagac
gaatggtactcccgcgtacgccgtgccgcaccgtggaaagatctgccaagacgtgttttt
gacgccacgctggatatgctttccggacgctatccctctggcgatttttctgcttttcgc
cccaaactggtctggaacagggagaccgggatattgaccgcccgacctggcgctcagctg
ttggcggttaccagcggcggcaccattccggatcgtggcatgtatagcgtgttattaccc
gaaggggaagaacaggccggttcgcgacgggtgggtgaactggatgaggagatggtatat
gagtcgcgggtgaacgatattatcactctcggcgcaacctcatggcggatccagcaaatc
acccgcgatcaggtgattgtgactcctgctccgggtcgttctgcccggctccccttctgg
cgtggtgaaggtaacggacgtccggctgaattaggcgagatgatcggcgattttcttcat
ttgctggcggatggagcgttcttttccgggactattcccccgtggctggctgaagaaaat
acgatcgccaatattcaggggttgattgacgagcagcgcaacgcgacgggtattgttccg
gggagtcgtcatctggtcctcgaacggtgccgtgatgaaattggcgactggcgtattatt
ttgcactctccctatggaagacgggtgcatgaaccctgggcgctggcgattgccgggcga
atacatgcgctttggggcgctgacgcgtctgtggtcgccagtgatgacggcattgttgcg
cgcattcctgacactgatggtaaattgcccgacgccgcgatttttttgtttgaaccagaa
aagttgctgcaaattgtccgcgaggcggtaggcagttcggcacttttcgccgcccgtttt
cgcgaatgcgccgcgcgggcattattaatgccgggccgcacgccgggccatcgcaccccg
ctttggcaacaacggctgcgcgccagtcagttgctggaaatcgctcagggatatccggat
tttccggccattctcgaaaccctacgcgaatgtctgcaagatgtttatgatcttcccgca
ctggaacgtttgatgcgtcgcctgaacggaggcgaaattcaaatatccgatgtaacgact
actacgccctcgcctttcgccacaagtttattgttcggctatgtcgcggaatttatgtac
cagagcgacgccccgctggcagaacgccgggcatccgtactgtcgctggacagcgagtta
ctgcgcaatctactcggacaggtcgatccgggggaattactcgacccgcaggtcattcgc
caggtggaagaagagttgcaacgactggctcctggcagaagagcgaaaggtgaagaagga
ttgttcgacctgctgcgcgaactggggccaatgaccgttgaagacctggcgcaacggcat
acaggcagcagtgaagagattgcctcgtatctggaaaatcttcttacagtaaaacgcatc
ttcccgacgatgattagtggacaggagcgtcttgcctgtatggatgatgccgccaggctg
cgcgatgccctcggcgtacgattaccagagtcactgccagagatttatttgcatagagtc
agttacccgcttcgcgacctctttctacgctatctccgggctcatgctctggtcacggct
gaacaactggctcatgagtttagtctcggtattgccattgtcgaagagcagcttcagcaa
ctgcgcgaacagggtctggtgatgaatctgcaacaagacatctgggtgagcgatgaagta
tttcgtcgtctgcgtttgcgctcgctgcaagccgccagagaagcgacgcgtcccgttgca
gccacgacctatgcgcgattgctgctggaacgtcagggcgtattacccgccaccgatggt
agcccggcgctctttgcctcaacatcgccaggcgtttatgagggggtggatggcgtgatg
cgggtgatcgaacagcttgccggagtcggcttacccgcctcactctgggaaagccagatc
ttgcctgcccgcgtacacgactattcgccagaagtgctcgatgaattactggcaaccggt
gcggttatctggtcggagcaaaaaaaactgggtgaagatgacggcctggtggcactgcat
ctacaggaatatgctgcagaatcgttcactcccgccgaagcggatcaggcgaatcgttcg
gcgctgcaacaagcgatagtcgctgttctggctgacggaggagcctggtttgcacaacaa
atcagccaacggatacgcgacaaaatcggcgaatcggttgatccctcggcactgcaagag
gcgttatgggcgctggtctggcaaggcgtcatcaccagcgatatttgggcaccgttacgc
gccctcacccgcagcagttccaacgcacgcacctcaactcgccgcagtcaccgggctcgt
cgtgggcgtcctgtctatgcacaacccgtctcgccgcgggtatcttacaacacaccaaat
ctggctggacgctggtcgttattgcaggtggagccactaaacgataccgaaaggatgctg
gcgctggcggaaaatatgctcgaccgctacggcatcatcagtcgtcaggcggtgatagcc
gaaaatatccctggcgggtttccatcgatgcaaacgctttgtcgaagtatggaagattcc
gggcgaattatgcgaggtcgttttgtagaaggtctgggtggcgcgcaattcgctgaacgt
ctgactattgaccgcttgcgcgacctggcgacacaagccgcgcaaacgcgccactataca
ccagtggcgctctccgccaacgatccggctaatgtgtggggaaatcttctgccctggcct
gcacatccggcaacgctggtaccaacgcgtcgggcgggtgcgctggtggtcgtttctggc
ggcaaattgttactctatctggcgcaaggtggcaaaaaaatgctggtctggcaggaaaaa
gaggaattactcgccccagaggttttccacgcgctgactaccgcactgcgtcgcgaacca
cggctgcgctttacgctaacagaagtgaatgatctaccggtctggcaaacgccgatgttt
acgctgctgcgtgaagcgggattttcaagttcgccacaagggctggattggggatag

DBGET integrated database retrieval system