Escherichia coli O55 H7 RM12579 (EPEC): ECO55CA74_13490
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Entry
ECO55CA74_13490 CDS
T02066
Name
(GenBank) helicase
KO
K19789
DNA repair protein RadD
Organism
elr
Escherichia coli O55:H7 RM12579 (EPEC)
Brite
KEGG Orthology (KO) [BR:
elr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
elr03400
]
ECO55CA74_13490
DNA repair and recombination proteins [BR:
elr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
ECO55CA74_13490
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Ortholog
Paralog
GFIT
Motif
Pfam:
ResIII
DEAD
Helicase_C
SWI2_SNF2
AAA_30
AAA_16
SLFN-g3_helicase
zf-tcix
AAA_22
DUF7577
Zn_ribbon_3
AAA
TerL_ATPase
Motif
Other DBs
NCBI-ProteinID:
AEZ41276
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Position
2766470..2768230
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AA seq
586 aa
AA seq
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MIFTLRPYQQEAVDATLNHFRRHKTPAVIVLPTGAGKSLVIAELARLARGRVLVLAHVKE
LVAQNHAKYQALGLEADIFAAGLKRKESHGKVVFGSVQSVARNLDAFQGEFSLLIVDECH
RIGDDEESQYQQILTHLTKVNPHLRLLGLTATPFRLGKGWIYQFHYHGMVRGDEKALFRD
CIYELPLRYMMKHGYLTPPERLDMPVVQYDFSRLQAQSNGLFSEADLNRELKKQQRITPH
IISQIMEFAATRKGVMIFAATVEHAKEIVGLLPAEDAALITGDTPGAERDVLIEDFKAQR
FRYLVNVAVLTTGFDAPHVDLIAILRPTESVSLYQQIVGRGLRLAPGKTDCLILDYAGNP
HDLYAPEVGTPKGKSDNVPVQVFCPACGFANTFWGKTTADGTLIEHFGRRCQGWFEDDDG
HREQCDFRFRFKNCPQCNAENDIAARRCRECDTVLVDPDDMLKAALRLKDALVLRCSGMS
LQHGHDEKGEWLKITYYDEDGADVSERFRLQTPAQRTAFEQLFIRPHTRTPGIPLRWITA
ADILAQQALLRHPDFVVARMKGQYWQVREKVFDYEGRFRRAHELRG
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgatttttacactccgcccatatcagcaagaagccgtggatgccacgctcaaccatttt
cgtcgtcataaaacccctgccgttatcgtgctgcccaccggtgcaggtaaaagcctggtg
atagcggaacttgcgcggctggctcgtggtcgcgtgctggtgctggcacacgttaaagaa
ctggtggcgcaaaaccatgcaaagtatcaggcgctggggctggaagccgatatttttgcc
gccgggctaaagcgcaaagagagccacggtaaagtggtatttggcagcgtgcagtcggtc
gcccgtaatcttgatgcctttcagggtgaattttcgctgttgattgtcgatgaatgtcac
cgtattggtgacgatgaagagagccagtatcagcaaatcctcactcacctgacaaaagtg
aatccccacttacgcctgctggggctgactgccacgccttttcgactgggcaaaggctgg
atctaccagttccattatcacggcatggtacgcggcgatgagaaagcccttttccgtgac
tgcatttatgaactgccgctgcgttatatgatgaaacacggctatctgacgccgccagaa
cgactggatatgccagtagtgcaatacgatttcagccgcttgcaggcacagagtaacggg
ctattcagcgaagccgatctcaaccgcgagctaaaaaaacaacaacgtattaccccgcac
atcatcagccagattatggagtttgctgcaacgcgcaaaggggtgatgattttcgccgcc
accgttgaacacgcaaaagagattgtgggattactacccgccgaagatgctgcactgatt
actggcgacacccccggcgctgagcgcgatgtgttaattgaagattttaaagcccagcgt
tttcgctatctggtcaacgtcgcggtactgaccaccggatttgacgccccgcacgtcgat
cttatcgccattctgcgccctaccgaatcagtgagtctttaccaacaaattgtcgggcgc
ggtctgcgtctcgctcctggcaagactgattgcttaattcttgattatgcgggtaatcct
cacgatctctacgcgccggaagttggtacaccgaaaggcaaaagtgacaacgttccggta
caggttttctgccctgcctgcggttttgccaacaccttttgggggaaaacgaccgccgac
gggacattgattgaacactttggtcgccgctgtcagggatggtttgaagatgacgacggt
catcgcgaacagtgtgacttccgtttccgttttaaaaattgcccgcaatgtaacgcagaa
aatgatattgccgctcgccgctgccgcgaatgtgacacggtactggttgatccggatgat
atgttaaaagcggcgctacgactgaaagatgcgctggtattacgctgtagcggcatgtct
ttgcagcatgggcacgacgagaaaggcgaatggttgaaaatcacctattacgatgaagac
ggcgcggatgtgagtgagcgtttccgtctgcaaacgcccgcccagcgaactgccttcgag
cagctttttatccgcccgcatacgcgcacaccgggcatccctctgcgctggatcaccgcc
gccgatatcctcgcccagcaagccttattgcgacacccggattttgtcgttgcccgcatg
aaaggtcagtactggcaagtgcgtgaaaaagtgttcgattacgaaggtcgttttcgtcgg
gcgcacgaattacgcggttaa
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