Escherichia coli O55 H7 RM12579 (EPEC): ECO55CA74_15015
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Entry
ECO55CA74_15015 CDS
T02066
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
elr
Escherichia coli O55:H7 RM12579 (EPEC)
Pathway
elr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
elr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
ECO55CA74_15015 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
elr03400
]
ECO55CA74_15015 (xseA)
Enzymes [BR:
elr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
ECO55CA74_15015 (xseA)
DNA repair and recombination proteins [BR:
elr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
ECO55CA74_15015 (xseA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
OMPdecase
Motif
Other DBs
NCBI-ProteinID:
AEZ41575
LinkDB
All DBs
Position
3101676..3103046
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AA seq
456 aa
AA seq
DB search
MLPSQSPAIFTVSRLNQTVRLLLEHEMGQVWISGEISNFTQPASGHWYFTLKDDTAQVRC
AMFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIVESMQPAGEGLLQQKYEQLKAK
LQAEGLFDLQYKKPLPSPAHCVGVITSKTGAALHDILHVLKRRDPSLPVIIYPTAVQGDD
APGQIVRAIELANQCNECDVLIVGRGGGSLEDLWSFNDERVARAIFASRIPVVSAVGHET
DVTIADFVADLRAPTPSAAAEVVSRNQQELLRQVQSTRQRLEMAMDYYLANRTRRFTQIH
HRLQQQHPQLRLARQQTMLERLQKRMSFALENQLKRAGQQQQRLTQRLNQQNPQPKIHRA
QTRIQQLEYRLAETLRAQLSATRERFGNAVTHLEAVSPLSTLARGYSVTTATDGKVLKKV
KQVKAGEMLTTRLEDGWVESEVKNIQPVKKSRKKVH
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgttaccttctcaatcccctgcaatttttaccgttagtcgcctgaatcaaacggttcgt
ctgctgcttgagcatgagatgggacaggtttggatcagcggcgaaatctctaatttcaca
caaccggcttccggtcactggtactttacactcaaagacgacaccgcccaggtacgctgc
gcgatgttccgcaacagcaaccgccgggtgaccttccgcccacagcatgggcaacaagtt
ttagttcgcgccaatattacgctctacgagccgcgcggcgactaccagataatcgttgag
agtatgcagccggccggtgaagggctgctgcaacagaagtacgaacagctcaaagcgaag
ttgcaggctgaaggattgttcgatctgcaatacaaaaaaccacttccctcccctgcgcat
tgcgttggtgtgatcacctcaaaaaccggtgctgcgctacatgatattttgcatgtgtta
aaacgtcgcgatccttctctgccggtgatcatctaccccaccgccgttcagggcgatgac
gcgccggggcaaattgttcgcgccattgaactggcgaatcagtgcaatgagtgcgacgtg
ttgatcgttgggcgcggcggcggttcgctggaagatttatggagttttaacgacgaacgc
gtagcgcgggcgatttttgccagccgcattccggtcgtcagcgccgtcgggcatgagacg
gatgtgaccattgccgattttgttgccgatctgcgtgcaccaacaccgtcggctgccgcc
gaagtggtgagccgtaatcagcaagagttactgcgccaggtgcaatcgacccgtcaacgg
ctggagatggcgatggattattatctcgccaaccgcacacgtcgctttacgcaaattcat
caccgattacagcaacagcatccgcagctccggctggcacgccagcaaaccatgcttgaa
cgcctgcaaaaacggatgagctttgcgctggaaaatcaacttaagcgtgccgggcaacag
cagcagcgattaacacagcggctgaatcagcaaaatccacagccgaagattcatcgcgcg
caaacgcgcattcagcaactggaatatcgtttagcagaaaccctgcgcgcacagcttagc
gccacgcgtgaacgtttcggtaatgcagtaacgcacctcgaagccgtaagcccactgtca
acgctggcgcgtggatacagcgttactactgctactgacggcaaggtactgaaaaaagtg
aagcaggttaaagcgggtgaaatgctaaccacacgtctggaagacggctgggtagaaagt
gaagtaaaaaacatccagccggtaaaaaaatcgcgtaaaaaagtgcattaa
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