Escherichia coli O55 H7 RM12579 (EPEC): ECO55CA74_15765
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Entry
ECO55CA74_15765 CDS
T02066
Name
(GenBank) DNA-binding transcriptional regulator CsiR
KO
K15735
GntR family transcriptional regulator, carbon starvation induced regulator
Organism
elr
Escherichia coli O55:H7 RM12579 (EPEC)
Brite
KEGG Orthology (KO) [BR:
elr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
elr03000
]
ECO55CA74_15765
Transcription factors [BR:
elr03000
]
Prokaryotic type
Helix-turn-helix
GntR family
ECO55CA74_15765
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FCD
GntR
HTH_41
Pox_A32
Motif
Other DBs
NCBI-ProteinID:
AEZ41721
LinkDB
All DBs
Position
3269667..3270329
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AA seq
220 aa
AA seq
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MTITSLDGYRWLKNDIIRGNFQPDEKLRMSLLTSRYALGVGPLREALSQLVAERLVTVVN
QKGYRVASMSEQELLDIFDARANMEAMLVSLAIARGGDEWEADVLAKAHLLSKLEACDAS
EKMLDEWDLRHQAFHTAIVAGCGSHYLLQMRERLFDLAARYRFIWLRRTVLSVEMLEDKH
DQHQTLTAAVLARDTARASELMRQHLLTPIPIIQQAMAGN
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atgaccattacgtctctggatggctatcgctggctgaagaacgatattattcgcggtaat
tttcaaccggatgaaaaattacgaatgagtttgctgacatcgcgttatgcacttggcgtt
gggccgttacgggaagctctttcgcaactggtggcggaacggctggtcacggtggtgaat
caaaaagggtatcgggtggcgtctatgtcagagcaggagctgctcgatattttcgacgcc
cgcgccaatatggaagcgatgttagtgagtctggcgattgcccgcggtggcgatgagtgg
gaggcagacgttctcgcaaaagcgcatctgctgagtaagcttgaggcctgtgacgccagc
gagaaaatgcttgatgagtgggatctgcgtcatcaggcgtttcatactgcaattgtggcg
ggctgtggttctcactatttgctgcaaatgcgtgaacggttgtttgatctggcggcgcgt
tatcgatttatctggctgcggcgaacggtgctttcggtggaaatgctggaggataaacac
gatcagcaccagaccctgactgcggcggtactggcgcgagataccgcgcgcgccagtgag
ttaatgcgccagcatttactgacgccaattcccattatccagcaggcgatggctggcaat
taa
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