Escherichia coli O55 H7 RM12579 (EPEC): ECO55CA74_16605
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Entry
ECO55CA74_16605 CDS
T02066
Name
(GenBank) RNA pyrophosphohydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
elr
Escherichia coli O55:H7 RM12579 (EPEC)
Pathway
elr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
elr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ECO55CA74_16605
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
elr03019
]
ECO55CA74_16605
Messenger RNA biogenesis [BR:
elr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
ECO55CA74_16605
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX
NUDIX_4
Nudt16-like
Motif
Other DBs
NCBI-ProteinID:
AEZ41886
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Position
complement(3442986..3443516)
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AA seq
176 aa
AA seq
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MIDDDGYRPNVGIVICNRQGQVMWARRFGQHSWQFPQGGINPGESAEQAMYRELFEEVGL
SRKDVRILASTRNWLRYKLPKRLVRWDTKPVCIGQKQKWFLLQLVSGDAEINMQTSSTPE
FDGWRWVSYWYPVRQVVSFKRDVYRRVMKEFASVVMSLQENTPKPQNASAYRRKRG
NT seq
531 nt
NT seq
+upstream
nt +downstream
nt
gtgattgatgacgatggctaccgcccaaacgtaggtatcgtgatttgtaatcgccagggg
caggtaatgtgggcccggcgatttggtcagcactcctggcaatttccgcaaggcggaatc
aaccccggagaatccgcagagcaggcgatgtaccgtgaattgtttgaagaagtaggatta
agccgcaaagacgttcgaatccttgcttcaacgcgtaactggttgcgctacaaattaccg
aaacgtttggtgcgttgggacacgaagccggtttgtatcggccaaaaacaaaaatggttt
ctcttgcagctggtgagcggcgatgcagaaatcaatatgcaaaccagcagtacaccagag
tttgacggctggcgatgggtaagttactggtatccggtcagacaggtggtgtcatttaaa
cgtgatgtctaccgtagggtaatgaaagagttcgcgagtgtggtgatgtcactgcaggaa
aatacgccaaaaccacaaaacgcatctgcttatcgacgtaaaagaggttaa
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