Esox lucius (northern pike): 105005616
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Entry
105005616 CDS
T04894
Symbol
cspg4
Name
(RefSeq) chondroitin sulfate proteoglycan 4
KO
K08115
chondroitin sulfate proteoglycan 4
Organism
els
Esox lucius (northern pike)
Brite
KEGG Orthology (KO) [BR:
els00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
els00535
]
105005616 (cspg4)
04091 Lectins [BR:
els04091
]
105005616 (cspg4)
Proteoglycans [BR:
els00535
]
Cell surface proteoglycans
Others
105005616 (cspg4)
Lectins [BR:
els04091
]
C-Type lectins
Others
105005616 (cspg4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin_3
Laminin_G_2
Laminin_G_1
Motif
Other DBs
NCBI-GeneID:
105005616
NCBI-ProteinID:
XP_012988335
LinkDB
All DBs
Position
LG19:complement(39700041..39770020)
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AA seq
2328 aa
AA seq
DB search
MRVFCAVLLGVFLPLLCLPSSSHGVSYFGDSFCRIMSIQDVSSFHLSLQFKTSRRSGLLI
LAAGMQDYLFLELQNGRLQVRMDLGSGEMVLLSSPGLQLNNLLEHKISITMKETKLTMLI
DDLFSTFIPVADTQADLNIDLGVYLGGTGDLETSYLSNAIPPFRGCMTNVKLESHQFNIL
ASEPIECHDTKESCSSEFEAGDGEATSFISPYSFVSFPTWIGVSDSGRTLEFLMKTTIED
ALLTFHPGLESDFIAVGIMGSYLKGVVDRGTGMVVLDNPKVQLGDDQWHRIRVTVNATVF
EINVDSQFASLTLSGSEQLDLVGNLYLGGIQGKMKEVFRDSSLSRMEEEITSESFIGCFG
DIKVDQKGRSLQDALVTKDVHVKCEGEDYDYSSYYDFEASTTTSPVRTRYVHVDSNEKHC
HPTEDTPVAFQNITKLLEVNPLFVPEGGEVVLDINNLRPTFDLNTVGIRQSQIIFTLQSD
PWYGLLDMNINSKRTKKFTLLDVVNKKIKYLHDGNEKYADQIQLEVVAHSNSYLPECLKN
PRLYVLPVEIIPVNDIPQLGGGDISITENGRTRLNPNLIKIVDSDTRCDELIVTVTSEPP
REVGYLENSLQPGRIIKQFTCKQLKDGNIYFVHRGGNAGITLQVSDGQSISHSTTFKLSA
IQPEMSLVTNTGLLLSQGSNSSIGIQNLAVLATPRNGDIVYNIKNTLRYGELQILTSSGL
YKQVTSFHQSDLEQDLLRYVSTESSDLEDVVADNIQFDVHLGQLSIWNNTFLIKITPTQV
KMSQLFPLEIEVGGEQKAIKQTELKAEVIGKSVPPENITYILLKTPMLGTLQMLGRELVE
GDSFTQQDIWNSQVSYRVRVRRTVASEDQFQFKVFAENQYSPVYTYPIMIKADSDAPVLT
NDRMIVMEGEESILNKDYLWVQTSSSSDFVYKVTQDPKYGRLIRDSPPGEPRFDGAVRVF
SNEDLNLDRLIYQHDGSESGNDEFSFLAFEQAVGSQNIQTDGHESISGVFRISIQSKNNH
VPLRVVDKTFNVVRNGQRLLTTEDILFKDDDSGFNDTQLVFVRTGILSGNIVSTSDPSQS
IFRFTQADLRDRNVLFVHHGADRERFQLQVSDGLHKTTALLQIQAGEAYLRVANNTMVVM
DHGSTKTLNTSLLSAESNMDIRDEREIRFEVTSPPSDGKIIVSGIEASWFTQEDLKKGVV
SYEHIDKSMRSKDSFGFTVKAKGFSDEGMFRIKIFKQGYRSEPEVFTNEVIISYEGEHTV
INQDHLKVVQDDILPSEMVYTIKEPPLLGHVVMLTNHSDSTVAPVLNYIQSFTQEDVNKG
RILYVSTSIQGSDAFVADVSNGFTAVESLQISVDIVPRLIPVQAQNFSVREGGEMALTTE
LLNISHPFYSSANVDFIVEEQPQYGNIRYLDGDDQELNIFTWEEVKLGHIYYLHDSTESI
EDSFTLSASAYEIQRRSLPVTFTVTVFPVNDEPPKLTHNTGLEVLAGEESDITTNMLNTE
DADTANEELVYSIESPINGMVALKVVPDVEIQNFTQAQINNGEVIFIHEGLESGGFSFTV
TDGEHTSPLHRFVVTARQLTISMDETGEELMVFPGTKQAITSAILKAVTNEEGDEIRFSL
VRPPRLGRLILANDRNQFEEITHFSQSELESGAVFYEHQMPEEPFWVVRDSVKLLLSSPP
APAIHHILPITVSYDAANHNVSSQLWKNKGLNIIQGQRKVIDSSILDASNLLFSLPESER
GKLDVIFELGHFPAHGQVTLGGQDLPREAPYFTQENITQGELEYLHDDSGDSMDSFSFRA
RVNYPGSSTPSQSHTQAVVLEEVFNISIRRRDSSPPELVSLDVLLEVLQGSMTVITQKFL
NTHDEDSTPDEVHFTVSKAPANGRLVDATTGAHISTFSQEAVNQHQVGFISDGSLSEGFL
EFTVSDGKHRTKPHTLHIGVLARVLVLAKAPEIQVLQGDDETLVTEEMLRVTTGGPNKEE
ILYKITSVPKYAAIMVDRQPTSAFTQTQIREGRVSVRFIKSTSPRDSVAFVARSRAANVS
SVLNITVKPLVKIPQDPLLPRGAIVLLDKKVLDATPLANKTRTSPSFSVIQQPRGARFIR
TGGRGPGADGSPVDTFTQKELDEGRVAMEIFNGTGGSQALDEARFLLKAHGVPPAECVLP
FKTAPYNASWVYPATILKVPAEAERSDRNDLPGGARRPYSENNIDWPHVGVDPTTSSANK
NSDRKSMVSRRNSLWSILIPILVILLLLLLASILAFYLVRRNKTGKHDVQTVASTKPKNG
EVSQETFRKTDPASNIPMSQMDSKDADPELLQHCRTTNPALKKNQYWV
NT seq
6987 nt
NT seq
+upstream
nt +downstream
nt
atgagagtcttttgtgcggtcctgctgggtgtctttttgcccctgctctgtctgcccagc
tccagccatggagtatcctactttggggatagtttctgccggatcatgtcgatccaagat
gtctcctcctttcacctgtcactgcagttcaagactagccgacgaagtggactcctcatt
ctggctgcagggatgcaggactatttgtttttggaactccaaaatggaagattacaggtg
cgaatggacctggggtccggtgaaatggtactgttatcatctccagggctgcaactgaac
aacctcctggagcacaagatctctatcacaatgaaggagactaaactcaccatgctgatt
gatgatttattctctacatttatccctgtggctgacacccaggctgacctcaatattgac
ttgggggtttacctggggggaacaggagatttagaaacctcatatctcagcaatgccata
cctccattccggggttgcatgaccaatgttaagttggagtcccaccagttcaacattctt
gcctcagaacccatcgagtgccatgatacaaaagagtcctgcagcagtgagtttgaagcc
ggggacggagaggcaactagctttatcagcccctattcatttgtgtcctttcccacttgg
attggagttagcgatagtggaaggaccttggagtttctcatgaagaccaccatcgaggat
gccctactcaccttccaccctggactggagtcagactttatagctgttggtattatgggc
agttacctaaaaggagtggtggaccgtggtactgggatggtagttctagacaaccccaaa
gtacagctaggtgacgatcaatggcacagaatcagagtcacagtaaatgcaactgtattt
gagattaacgtggacagccagtttgcctctctcactctaagcggttcagagcaattggat
ctagtcggaaatctatatttgggaggtatccagggcaagatgaaagaggtatttcgcgat
agcagcttgtctcgtatggaggaggaaataacatctgagagttttataggatgttttggg
gacatcaaagtggatcaaaagggcagaagcctgcaggatgctttggtcaccaaagatgtc
catgtgaaatgtgagggagaggactatgactactcaagttactatgattttgaggcatcc
acaactacgtctcctgttcgaacccgatatgtccatgtagactctaacgaaaaacattgc
catccaacagaagacacaccagtggcattccagaacattacaaaactccttgaagtcaac
ccattgtttgttcctgaaggtggggaagttgttcttgacattaacaacctcaggcctacc
tttgaccttaacactgtaggaatccgtcaatctcagatcatctttactcttcaaagtgac
ccttggtatggactgctagatatgaacattaattccaaacgtactaagaagtttaccctt
ctagatgttgtcaacaagaagatcaagtatctccacgatggcaatgagaagtatgccgat
cagattcagttagaggtggttgctcatagtaacagttaccttccagaatgtctaaaaaat
ccccgtctgtatgtcctcccagtagagatcatacctgtcaatgacataccgcaactaggt
ggaggggacatttcaatcacagaaaacggacgcactcgcttgaatcccaaccttatcaag
attgtagattcagacactcggtgtgatgagttgattgtcactgtgacgtccgaacctccc
agagaagtgggctacttagaaaattctcttcaaccaggaagaattatcaaacagttcaca
tgcaagcagttgaaagatggcaatatatattttgttcacagaggtgggaatgctgggata
actctgcaggtatctgatggacaatccataagtcattcgaccaccttcaaactgtccgct
atacagcccgaaatgagcctggtgaccaataccgggcttctgttgtctcagggaagcaac
tcttccattgggatccagaacctggctgtccttgccacccctcgtaatggagatattgtg
tataacattaaaaacactctgagatatggagaattgcaaattctcaccagcagtggtttg
tataaacaagtaacatcttttcatcaatcagatttagagcaagatctcttgagatacgtt
agcacagaatcaagtgacctggaagatgttgtagcagataatattcaatttgatgtccat
cttggacagttatccatttggaacaacactttcttgattaagatcacacccactcaggtt
aaaatgtcccaattatttccccttgagattgaggttgggggagagcaaaaggcaatcaaa
caaactgagctgaaagcagaagtgataggaaaaagtgttcccccagaaaatataacatac
attctcttgaagaccccgatgttggggactcttcagatgcttggcagggagttagttgag
ggagacagtttcacccaacaggacatctggaattcccaggtcagctatagagtccgggtt
cgaaggactgtggctagcgaggaccagtttcagtttaaagtctttgcagaaaatcaatac
tcccctgtgtacacctacccaatcatgatcaaggctgattcagatgcccccgttttgacc
aatgacagaatgattgtcatggagggtgaagagagtattctgaataaagactatttatgg
gttcagacatccagctcatctgacttcgtttacaaagtgacccaagaccccaagtatggc
cgtctcatcagggactccccacctggagagcccagatttgatggggccgttagagtgttc
agcaatgaagacctgaatctagatagactgatctaccagcatgatggctccgagtccggc
aatgatgagttttctttcctggcatttgagcaagcagtaggtagtcaaaacatccaaact
gatggtcatgaatcaatcagcggtgtgtttagaatatctattcaatccaagaacaatcac
gtgcctctcagggtggtcgacaaaaccttcaatgtggtccgaaatggacaacgcttgttg
accactgaagacatccttttcaaggacgatgactctgggttcaacgatacccagttggtg
tttgtacgtaccggtattctctcaggaaacattgtgtccacctctgacccctcacagtcc
atcttccgtttcacccaagccgacctgagagaccggaatgttctctttgtgcaccatgga
gcagaccgtgaacgcttccaacttcaggtgtctgatggcctacacaagaccacagccctg
ctgcaaatccaggctggggaagcctacctcagggtagctaacaataccatggttgtcatg
gaccatggaagcaccaagactctcaacaccagtttgttgagtgcagagtctaatatggat
atcagagatgaaagggagattaggtttgaagtgacatcgccacctagcgatgggaagatt
attgtgagtgggatcgaggcatcttggttcacccaggaggatctgaaaaagggagtggtg
tcctatgagcatattgacaagagtatgaggtccaaggattcatttggcttcactgtcaaa
gcaaaaggattttcggatgagggcatgtttaggattaagatattcaagcaaggctaccgg
tctgaacctgaggtcttcaccaatgaggtcatcatctcctatgagggagagcacactgtg
atcaaccaggaccatcttaaggtggtgcaagatgatatcctgccttctgagatggtttac
accatcaaggagccacctctcctcggccatgtggtcatgctgaccaaccattcagacagt
acggtggcacccgtccttaactacatccagtctttcacccaggaagatgtcaacaagggc
cggatcctctacgtctctacctccatccagggcagtgatgcctttgtggccgacgtcagc
aatgggtttaccgctgtggagagcctgcagatatccgtggacattgtgcctcgccttatt
cccgttcaggcccagaacttcagtgtgagggagggtggcgagatggctctcaccacggag
ctcctgaatatctctcaccccttctacagttcagccaacgtagacttcattgtggaggag
cagccacagtacgggaacatccgttatctggatggggacgaccaggagctcaacatcttc
acgtgggaggaggtgaaacttggacacatctactacctccatgacagcacggaaagcatt
gaggacagcttcacgctctccgcctcggcctatgagatacaacgcaggagcctccctgtc
acctttactgtcactgtcttcccagtcaacgacgagccgcctaaactgacacacaataca
ggactggaggttttagctggagaggaatcagacatcaccactaacatgctgaatacagaa
gatgcagacactgctaatgaagagttggtttattccattgagtcacctatcaatggcatg
gtcgctctaaaggtggttcctgacgtagaaatccagaacttcacacaggcacaaattaac
aacggggaagtaatcttcatccacgaaggtctggaatctggaggcttcagtttcactgtg
acagacggagagcacacgtctcctcttcaccgctttgtcgtcacggccagacagctcacc
atctccatggacgaaaccggggaggaacttatggtctttccaggaacaaaacaagccatt
accagtgctattcttaaggctgtgaccaacgaggaaggagatgaaatacgcttctcttta
gtcagacctcctcgtctggggagactgatcttagctaatgacaggaaccaatttgaagag
atcacacacttctctcagtcagagctggagtctggggccgtcttctacgagcatcagatg
cctgaggagcccttctgggtggtgcgggactcagtgaagctcctgctctcctctcctcca
gcccctgccatacatcacatcctccccatcactgtgtcctacgacgcagccaaccacaac
gtctcctcacagctttggaagaacaaaggtctgaacatcatccaaggtcagaggaaggtc
attgatagttccattctggatgcatccaatctgctattcagtctgcctgagtcggagcga
ggcaaactggacgtgatcttcgagctgggccacttcccagcccatgggcaggtcacccta
ggaggccaggacttgccgcgggaagccccctacttcacacaggagaacataacccagggt
gaattagagtacctccatgatgactctggagactctatggacagtttttccttccgggcc
cgggtcaactatccgggcagcagcaccccttcccaatcccatacgcaggccgtggtcctg
gaggaggtcttcaacatctccatccgaagaagggactctagtccaccagagctggtgagt
ctggatgttcttctagaagttctccagggctccatgacagtgatcactcagaaattcttg
aacacccacgacgaggacagcacccccgacgaagtgcacttcaccgtctccaaagcacct
gccaacgggcggctggtggatgctaccaccggtgctcacatctccacattcagccaggag
gcagtcaaccagcaccaggtgggcttcattagtgatgggagcctgtcagaaggcttcttg
gagttcactgtttcggacggcaagcaccgcactaagcctcacacactccatataggagtt
ctggcccgggtactggtgctggccaaagccccagagatccaggtgctgcagggggatgac
gagaccctggtgacggaggagatgttgagggtcacgacaggcggacccaacaaggaggaa
attctctacaagatcaccagtgtgcccaagtacgccgccatcatggtggaccggcagccc
acctcagcctttactcagacccaaatcagagagggccgggtgagtgtccgcttcatcaag
tccacctcccctagggatagtgtggcctttgtggcccggagccgggcagccaatgtctcc
tcagttctgaacatcacagtaaagcctctagtaaaaatcccccaggatcccctgctgcca
cgcggtgccatcgtactactggacaagaaagttctcgacgcgacgccactggccaacaag
acacggacctcaccctccttcagtgttattcagcaaccacgtggagcccgcttcatccgg
accggagggcgagggccaggagcggacggcagtcctgtggacacattcactcagaaagaa
ctggatgagggccgcgtggccatggagatctttaatgggactgggggcagccaagcccta
gatgaggctcgcttccttctcaaggcccacggggtccctcccgctgaatgtgttctgcct
ttcaaaacagccccgtacaacgcctcatgggtctacccagccaccattctcaaggtccca
gccgaggctgaaaggtctgaccgcaatgacctcccaggaggggcaagacgtccatattca
gagaacaacatagattggcctcacgtaggagttgaccccaccacctcctctgccaacaaa
aactcggataggaaatcaatggtttccaggagaaacagtctgtggtctattctaatcccc
atcctggttatcctgctgcttctcctgttggcatccatcttggctttctatctggtgcgg
cgtaacaagacaggcaagcatgacgtgcagaccgtggcaagcacaaagcccaaaaatgga
gaggtcagccaggagactttccggaaaaccgacccagcaagtaacatccccatgtcccaa
atggactccaaagatgctgacccggagttgctgcagcattgtcggacaacgaacccggcg
ttaaaaaagaaccaatactgggtataa
DBGET
integrated database retrieval system
