Esox lucius (northern pike): 105005945
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Entry
105005945 CDS
T04894
Symbol
katnb1
Name
(RefSeq) katanin p80 WD40 repeat-containing subunit B1 isoform X1
KO
K18643
katanin p80 WD40 repeat-containing subunit B1
Organism
els
Esox lucius (northern pike)
Brite
KEGG Orthology (KO) [BR:
els00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
els04812
]
105005945 (katnb1)
Cytoskeleton proteins [BR:
els04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
105005945 (katnb1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Katanin_con80
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
WD40_MABP1-WDR62_1st
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_DCAF4
Beta-prop_TEP1_C
Beta-prop_SCAP
Beta-prop_WDR75_1st
NBCH_WD40
Beta-prop_IFT122_1st
Beta-prop_SPT8
Beta-prop_EIPR1
Beta-prop_IFT140_1st
Beta-prop_Vps41
WDR90_beta-prop_4th
WD40_RFWD3
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_RIG_2nd
Beta-prop_RIG_1st
eIF2A
Beta-prop_VPS8
Beta-prop_DCAF12
Beta-prop_WDR35_TULP_N
Beta-prop_LRRK2
Beta-prop_IP5PC_F
PROPPIN
Beta-prop_NUP159_NUP214
WD_LRWD1
Ge1_WD40
RMC1_N
Cytochrom_D1
Motif
Other DBs
NCBI-GeneID:
105005945
NCBI-ProteinID:
XP_012986576
UniProt:
A0A3P8ZLA9
LinkDB
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Position
LG02:38060242..38148166
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AA seq
703 aa
AA seq
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MAVANTTKTSWKLQEIVAHSSNVSCLALGKSSGRLLATGGEDCRVNIWAVSKPNCIMSLT
GHNNPVSCVQFNNSEEQVVAGSQSGSLRVWDLEAAKILRTLMGHKANICSLDFHPFGEYL
ASGSMDTNIKLWDVRRKGCVFRYKGHTQAVRCLAFSPDGKWLASASDDSTIKLWDLTAGK
MITEFTAHTGAVNIMQFHPNEYLLASGSSDRTIKLWDLEKFKMIGSSEGETGPVRCLAFN
LDGCCLYSGAVDSLRVYGWEPDRCFDLVPVGWGKVADLAVCNHQLIGVSYNLTNVSSYVV
DLMRVKKSGSVIQGMIQDDQPLPEPSLKGSTLRRNYDRPLTTCNAQRVKQSSVSERRSPE
GERRSPSSEDEKDEKESSAEIRNPEDYKEIFQPKSSISRTPPKSEPFPAPLEDESFVVRA
NQGLAELMTPLPDRQQPSLLKNPPVASSTPVLRVEPTVVATAPRPISVVTTRSQISNHTP
APCPDPPQPVAIAKAKTQTSIIFSTRNEPIGLNVGDFLPPARNNRPSVLSDDEALAQIRK
GHDTMCVMLTSRHKNLDTIRSVWGSGDVKTSLDSAVSMKDLSIVVDILNIINLKASLWKL
DLCTSILPQIEELLQSKYESYVQTGCTSLKLILKRFWPLISDTLTAPPSVGVDITREERH
QKCKACFKQLKNLSNVVKNKADKVGRHGSTFKELQLLMAPLDY
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atggctgtggccaacaccaccaaaacgtcatggaaattacaggagattgtggcccactcc
agtaatgtgtcttgtctggccctggggaaaagctcaggccgtctgctggccacgggtggt
gaggattgccgagtcaacatctgggctgtcagcaaacccaactgcatcatgagtctgact
ggccataataacccggtaagttgtgtacagtttaataactctgaagaacaggtggtggct
ggctctcagtctggatcgctgcgcgtatgggatctggaggctgcaaagatcctgagaact
ctaatgggccacaaagccaacatctgcagcctggacttccacccgttcggggagtacctg
gcatctggctccatggacaccaacatcaagctctgggatgtacggagaaagggctgcgtg
ttcaggtacaagggtcacactcaggcagtgaggtgtctagccttcagtccagatgggaaa
tggttggcctccgctagtgatgacagcaccatcaagctttgggacctgactgcagggaag
atgatcacagaattcacagcacacactggagctgttaacataatgcagttccatcccaac
gagtatctgctagcatcaggcagctctgacaggaccataaaactgtgggatctggagaag
ttcaagatgattggctcttcagaaggagaaacggggcctgtcaggtgtctggcctttaac
ctggatggctgctgcctatacagtggtgctgtggactctctgcgggtgtatggctgggaa
cctgatcgctgttttgacctggtgccagtgggttggggcaaggtggctgacctggctgtc
tgcaaccatcaattgattggcgtgtcgtacaacctgactaatgtttcttcctacgtggtg
gatctgatgcgggtcaagaagtccggctctgtcatccaaggcatgatccaggatgaccag
ccactcccagagccctccctgaaaggatccacgttacgacgtaactatgaccggcctctc
accacctgcaacgcacagagggtaaagcagagctcagtttcggaacgacgcagtcctgag
ggggagaggaggagtcccagtagcgaggacgagaaagacgagaaggagtcttctgctgag
atccgtaaccctgaggactacaaagaaatcttccagccaaagagctctatctctcgcacc
cctccaaagagtgagcccttccctgccccactagaagacgagagttttgttgtgagggct
aaccaaggcctggcagagctcatgactcctctacctgacagacaacagcctagcttgttg
aagaaccctcccgtggcctcctccactcctgtcctcagggtggaacctacagtggttgcc
acagcaccccgtcccatttctgtggtaacaacacgatctcaaatctccaatcacacacct
gcaccctgcccagaccccccacaacctgttgctattgcaaaggcaaaaacccagaccagc
atcatcttctccaccaggaatgaaccaataggactcaacgtaggagatttcctgcctcct
gctcgtaacaaccgtcccagtgttctgagtgatgacgaagctttggcccagatcagaaag
ggccacgacaccatgtgtgtgatgcttaccagccgacacaagaacttggacaccatccga
tctgtttggggcagtggggatgtcaagacctctttggactcggccgtgtcgatgaaggac
ctctctattgttgtggatattctcaacatcattaatctcaaagcgtcgctgtggaaacta
gacctgtgcacctcaatcctgcctcagatcgaagaactgctgcaaagcaagtatgagagt
tacgtgcaaacaggctgtacatctcttaaactgatcctgaaacgcttctggcctctcatc
tctgacacactgacagcgcccccttctgtcggagtggatataacacgggaggagcgccac
cagaagtgcaaggcatgtttcaagcagctgaagaacctcagcaatgtggtgaagaacaag
gccgacaaggtgggtcgccatggtagcacctttaaagagctacaattgctcatggcccca
ctggactactaa
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