Esox lucius (northern pike): 105005986
Help
Entry
105005986 CDS
T04894
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 isoform X1
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
els
Esox lucius (northern pike)
Pathway
els03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
els00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105005986
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
els03041
]
105005986
03009 Ribosome biogenesis [BR:
els03009
]
105005986
Enzymes [BR:
els01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
105005986
Spliceosome [BR:
els03041
]
Complex A
U2 snRNP components
U2 related factors
105005986
Complex B
105005986
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
105005986
Ribosome biogenesis [BR:
els03009
]
Eukaryotic type
90S particles
Helicases
105005986
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
DEAD
AAA_22
AAA_19
AAA_25
nSTAND3
SRP54
Flavi_DEAD
AAA_29
Atrophin-1
Motif
Other DBs
NCBI-GeneID:
105005986
NCBI-ProteinID:
XP_010862574
UniProt:
A0A3P9AE37
LinkDB
All DBs
Position
LG25:complement(21659471..21720014)
Genome browser
AA seq
761 aa
AA seq
DB search
MSKRHRLDLGEDYSSKKRSDGKDRDRDRDRDERSKDRDRDRERDRDRDRDRDIKSSVVPP
NHLLAGGGMLPLKQTAMQQQINPFTNLPHTPRYYEILKKRLQLPVWEYKERFNDILARHQ
SFVLVGETGSGKTTQIPQWCVDMVKGLGGPKKAVACTQPRRVAAMSVAQRVADEMDVMLG
QEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDPLLERYGVIILDEAHERTLATDILMG
VLKEVVRQRSDLKVIVMSATLDAGKFQVYFDSCPLLTIPGRTHPVEIFYTPEPERDYLEA
AIRTVVQIHMCEEEEGDCLLFLTGQEEIDEACKRIKREIDDLGPEVGDIKVIPLYSTLPP
QQQQRIFESAPPRKPSGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVE
SLLVTAISKASAQQRAGRAGRTRPGKTFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQL
KKLGIDDLVHFDFMDPPAPETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQLAKM
VIASCEFNCSNEILSITAMLSVPQCFVRPTEAKKAADESKMRFAHIDGDHLTLLNVYHAF
KQNHESTQWCYDNFVNYRSLMSADNVRSQLSRIMDRFNLPRRSTEFTSRDYYINIRRALV
TGFFMQVAHLERTGHYLTVKDNQVVQLHPSTVLDHKPEWVLYNEFVLTTKNYIRTCSDIK
PEWLVKVAPQYYEMGNFPQCEAKRQLERIVAKLQTKEYSQY
NT seq
2286 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaaagacaccgtttggatctaggggaggactactcaagtaagaagaggtctgat
gggaaagacagagatcgagatagggaccgtgatgagcgatccaaagacagggaccgcgac
agagaaagagatcgtgaccgggaccgagatagggacattaagtcatctgtcgtaccacct
aaccacttgttggctgggggaggcatgctcccccttaagcagacagctatgcagcagcag
atcaatccatttaccaacctgccccacacgccacgctactacgagatcctgaagaagagg
ctgcagctacctgtgtgggagtacaaggagcgtttcaatgacattctggcacgccaccag
agctttgtgcttgttggagagacgggctctgggaaaaccacacagattccccagtggtgc
gtagacatggtgaaaggtttgggtggccccaagaaggcggtggcctgtacccagcccagg
agggtggctgctatgagcgttgcccagagagtcgcagacgagatggatgtcatgcttggt
caggaggtgggctactccatccgattcgaggactgcagttctgctaagaccatactgaaa
tatatgaccgatggtatgttgcttcgggaagccatgaatgaccccttgctggagcggtat
ggtgtgatcatcctggatgaggcccacgagagaacgctagctacggatatcctgatggga
gtcctaaaggaggtggtccgacagagatcagacctcaaggtgattgtgatgagtgccaca
ttagacgctgggaagttccaggtgtactttgacagctgtcctttgctgaccattcccgga
cggacacaccccgtggagatcttctacacacctgagcccgaacgggactacctagaagct
gccatccgaacggttgtccagatccacatgtgtgaggaagaggagggggactgtctgcta
tttctcaccggacaagaggaaattgacgaagcctgtaaacgtatcaaacgggagatagac
gatttgggacctgaagtcggggatatcaaagtcattccactatattccacattacctccc
cagcagcaacagagaatctttgagtctgcacccccgaggaagcccagtggtgcaatagga
agaaaggttgtggtttccacaaacatcgctgagacatcccttaccattgatggtgtggtg
tttgtgattgatcccggttttgccaagcaaaaggtttacaaccctcgtatcagggtggag
tctcttcttgtcacagccatcagtaaagcttcggcccagcagagggccggccgtgcaggc
agaactcgaccggggaagactttccgcctctacactgagaaagcctacaagacagagatg
caggacaacacttatcccgagattctccggtccaatttgggatctgttgtgttgcagttg
aagaagctgggtatcgatgacctggtccactttgacttcatggatccaccagccccggag
actctgatgcgggcgcttgagctgctcaactaccttgctgcgcttaacgacgacggcgac
ctgacagaactgggctccatgatggcagagttccccctggatccccagctagccaagatg
gtgattgccagctgcgagttcaactgctccaacgagatcctctccatcactgccatgctg
tcagtcccgcagtgtttcgtccgccccaccgaggctaagaaggcggcggacgagtccaag
atgcggtttgcccacatagacggagaccacctgacgctcctcaacgtctaccacgctttc
aaacaaaaccatgagtccacacagtggtgctacgacaactttgtgaactaccgttcactc
atgtctgctgacaatgttcgctcgcagctgtcccggatcatggaccgcttcaacctaccc
cgccgcagcacggaattcaccagcagagactattacatcaacatccgccgagcactcgtc
acaggcttcttcatgcaggtggctcatttggagcgcacaggccattacctcacagtaaag
gacaaccaggtagttcagctgcatccttccacagtcctggaccataagccagagtgggtg
ctctacaatgagtttgtcctcaccacgaagaactatattcgcacctgctcagatatcaaa
ccagaatggctggtaaaggttgctcctcagtactatgaaatgggcaacttcccacagtgt
gaagccaagaggcagctggagcgaattgttgccaaactccagaccaaggagtattcccaa
tattga
DBGET
integrated database retrieval system
