Esox lucius (northern pike): 105006069
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Entry
105006069 CDS
T04894
Symbol
ndc1
Name
(RefSeq) nucleoporin NDC1 isoform X1
KO
K14315
nucleoporin NDC1
Organism
els
Esox lucius (northern pike)
Pathway
els03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
els00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
105006069 (ndc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
els03019
]
105006069 (ndc1)
Messenger RNA biogenesis [BR:
els03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
105006069 (ndc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ndc1_Nup
UNC-79
Motif
Other DBs
NCBI-GeneID:
105006069
NCBI-ProteinID:
XP_028974968
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All DBs
Position
LG03:1636932..1649825
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AA seq
672 aa
AA seq
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MFSADQSCWFVRKVIFWRAVASIAWSVLLLPPTTALYVVLSRFSLFHPLQWLTECLTVLT
SASAIFSFILLCGVVLLVGFFNLEYYSVVPSIACSKIALLGHVLHPRQFFHSLVHCIMGV
VVAWCCAVTIGGRYQALGYPCMKDESGPQMCLNENHLVLLLAGAFVGYSHSLLGLVHNMN
YISFHTVQQYKYLCFKGTLPLVMRASAVQALYSLRNFLALYFFMGYVPRAWVCRTLDLQV
DSSVYSLDSVSGLLDLSLLYQLWISASFLLFTWYITVLLFRIFVTEAYSFPVQPTFQEDA
HQCLPEVITGKQPTILKFLALQDLARLSNHCPSRRQEVFSLSQPGGHPLTWTAVNRECLS
LLSDLTERLVSHHDNVASNGRTKLQSIGSDKKTSSESSGSSVGLEDIRTPWPSTVLRTPG
SVFLRSSVGAGPGGLGTPLTAPFTPDLDSPFTSPALRLLTAPPGPLSPGYSSIQSPHIMR
RGPKLWSASPDSQLNGSPPASPAPSPAQLERKPSFLVTFLQNRKYQVKQFLAKRVVIMYL
FYKLPEASSQALFADSQAHIWALEGLSHLVAASYSEDQYGVVQTTLPSILSAMLMLQEAV
DRHFKLPHASSKPGRSSFSMGDSSYKTLRFALRATLKTSIYRITATFGEHLNAVQMSSEH
RKRLQNFLEYKE
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atgttttctgcggatcaaagctgttggtttgttcgtaaggtaatcttttggagagcagtg
gccagtatagcctggtctgtcctgctgttgcctcccaccacagctctctatgtagtcctc
agtagattcagtctgtttcaccctctacagtggttaacagaatgcctgacagtgctgacc
agtgccagtgccatcttctcctttatcctgctgtgtggagtggtgctactggtgggcttt
ttcaacctggaatactactcagttgtcccatccatcgcctgctcgaagatcgccctgttg
ggtcatgtgctgcacccccgtcagttcttccactcgcttgtgcactgcattatgggagtt
gttgttgcgtggtgttgtgctgtcaccatcggagggcgctaccaggccttggggtacccc
tgtatgaaggacgagagtggtccccagatgtgcctgaatgaaaaccacctggtgctgctg
ctggcgggggccttcgtgggctacagtcatagcctgcttgggttggtccacaacatgaac
tacatctccttccacaccgtgcagcaatacaagtacctctgcttcaaggggactctgccc
ctggtgatgagagccagtgctgtccaagctctctactccctcaggaacttcctcgccctc
tacttcttcatgggctatgttccacgggcctgggtctgcagaacactggacctccaagtc
gacagttcggtttactcgctggacagtgtctctggcctgctggacctgtctctgctctac
cagttgtggatcagtgctagcttcctcctgttcacctggtacatcactgttctgctcttc
aggatctttgtcacagaggcttacagtttccctgtccaacccaccttccaagaggacgcc
caccagtgtcttccagaggtcatcaccggcaagcaaccaacaatactgaaattcctagcc
ctccaggacctggcccggctgtccaatcactgcccctccagacgtcaggaggtgttcagc
ctcagccaaccaggcggtcaccctctcacatggacggctgtgaacagggagtgtctgtct
ctgttgtctgatctgactgagaggctggtgagtcaccatgacaacgttgctagcaacgga
cggaccaagttgcagtccatcggcagtgacaagaagacctcctcagagagctccgggtct
tctgttggtttggaggacatacggaccccctggcctagcactgtgctccgaactcccggc
tctgtgttcctgcgttcctctgtgggggcggggccgggggggctggggacccccttgaca
gcccccttcaccccagacctagacagccccttcacctccccggccctacgactcctcact
gctcctccagggcccctgtcccctggctacagctccatccagagcccacacattatgagg
aggggccccaagctgtggtcagcttctccagactcccagttgaacggtagtcccccagcg
tctcctgcccccagccccgcccagttggaacgcaaacccagcttcctggttaccttccta
cagaacaggaagtatcaggttaaacagttcttggcaaagagggtcgtgataatgtacttg
ttttacaagctccctgaagcctccagtcaggccctgtttgctgacagccaagctcacatc
tgggcattagaaggtctgtctcacctggtggcagcatcctactcagaagaccagtatgga
gtagttcagaccaccctacccagtatcctctctgccatgctcatgttacaagaggcggtg
gaccgtcacttcaagctgccccacgcctcctctaagccgggccgctcctccttcagcatg
ggagacagcagctataagacgctccgctttgccctgcgagccacactgaagacctccatc
tacaggatcaccgctacctttggagaacatctgaatgccgttcagatgtcatctgagcat
cggaagagactgcagaacttcctggagtacaaagagtaa
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