Esox lucius (northern pike): 105006894
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Entry
105006894 CDS
T04894
Symbol
dhx57
Name
(RefSeq) putative ATP-dependent RNA helicase DHX57 isoform X1
KO
K13026
ATP-dependent RNA helicase DHX57 [EC:
5.6.2.6
]
Organism
els
Esox lucius (northern pike)
Brite
KEGG Orthology (KO) [BR:
els00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
els03012
]
105006894 (dhx57)
Enzymes [BR:
els01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
105006894 (dhx57)
Translation factors [BR:
els03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
105006894 (dhx57)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
RWD
DEAD
HA2_N
zf-CCCH_4
AAA_22
zf-CCCH
Torus
AAA_19
nSTAND3
NB-ARC
NPHP3_N
AAA_14
Viral_helicase1
AAA_16
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
105006894
NCBI-ProteinID:
XP_028976311
LinkDB
All DBs
Position
LG06:13742805..13754343
Genome browser
AA seq
1529 aa
AA seq
DB search
MSGRRRGQPNRGGGRFNKPRGSGRGRGGGGGGGGKATSSVWDDGDDFSLDFGPSRSSRGR
GARGGSGGNWGSSGARGRGGRGRGTSGGRGTSGGRGTSGGRGQGGGRGQGGGDRGWGKGR
GLPKSLISQTPRPRTLDEYRPRLRPEVTGNMPMQKIFMTSENQEQVKELLRELQTQDYDD
EPYEEEEDYEEEEEEEEYDELDYRDEGQFWTTHDDPVESTESPVCDPDSEEDRRPSPQPV
IGLFAIGKLCRYGFDRERSRQALETGVGEVGATLEQLLLQVFSERYRPEAISPGGLQGAP
MDECLTQRQEEALALTAIYGDRFTERIANSVWTVTLDPDFLAGIAGRNRKADAPTNGPVH
IRDVCRFYLKGAGCRFGAKCKYKHQMPTEENASGPREPVGASQPGFSSYSSPEYEMEVRF
PKGNRYPFQAPIVAFSTNDEAIGAAARLSVTEHLFGEALAAAKEGEPVVYTLITCCEDEA
TMKELLSVTHHKYSSPPPVIVAPPPIAMSKSRGGRSNASREETKCNMNTSSNPSTNSRTA
PNNNSTGNSRTAPNNNSTGNSRTAPNNNSTGNSRTAPNNNSTGNSRTAPNNNSTGNSRTV
PTSRNSTYRPLQATEDLEDDEDEEEEEDVVVPETESYVNLRKKMVKRHEERTDARQQENE
KLCREFRKKKSSRRFASMLQQRQKLPAWHEKENILDLLDTCQVLVVSGMTGCGKTTQIPQ
FILDASLTGPAEQVANIICTQPRRISAITVAERVAQERAERLGNSVGYQIRLETVRSAAT
RLLYCTTGVLLRRLEGEADLAGISHVIVDEVHERTEESDFLLLVLKDLMAQRPDLKIILM
SATLNADLFSHYFHNCNTIHIPGRTFPVDQFFLEDAIAKTRYVIEDGSPFMRSGGGKDKS
SWGGRGAAKEPVDQLGDDMWSFMNLQKKDFVKDSIPDQQLGLQELTVRYKDTKMSVLKTI
AAMDLDKINMDLVENLLEYIVDGNHGYPPGAVLVFMPGLAEIKALYEQLQSNRMFNNRKR
TRCVVYPLHSSLSNEEQQAVFSRPPDGVTKIIISTNIAETSVTIDDVVYVVDSGKMKEKS
YDASKSMESLEETWVSRANALQRRGRAGRVASGVCFHLFTSHCFQHHLAEQQLPEIQRVP
LEQLCLRIKILDVFAERTLESVFCRLIEPPATGSLDAAKQRLQDLGALTADEKLTPLGYH
LACLPVDVRIGKLMLFGAIFRCLDPALTIAASLAFKSPFVSPWDKREEANEKKLNFALAN
SDHLALLQAYKGWCKAARNGNQTGYQYCRENFLSSRGLQEIASLKRQFTELLSDIGFVKE
GLKARVIERMATKGTDGVVEATGREANLNSDNIRLMSAMLCAALYPNVVQVRSPHEKFKQ
TSKGAVKMQPKADELRYMTKNDGCVHVHPSSVNYTVRHYDSPYLVYHEKVKTSRVFIRDC
SMVSVYPLVLFGGGQVSVELQKGEFVISLDDGWIRFAAASHQVAELVKELRWELDQLLED
KIRNPSIDLCTCPRGSRIIHVIVKLISTQ
NT seq
4590 nt
NT seq
+upstream
nt +downstream
nt
atgagtgggagaaggaggggacagcccaacagaggtggagggcgatttaataagcctcga
ggaagtgggagaggaagaggtggtggtgggggaggcggtggaaaggcaacaagcagtgtc
tgggatgatggtgacgatttcagcctagattttggacccagtcgctcaagcagaggaaga
ggtgctcgaggtggcagtggtggcaactggggtagcagcggagctagaggtagaggagga
agggggaggggcacaagtggagggaggggcacaagtggagggaggggcacaagtggaggg
aggggtcaaggaggagggaggggtcaaggtggtggagataggggatggggtaaaggtagg
ggtttacccaagtctctcattagccagacaccccggcctcggacactggatgagtacagg
cctcgcctcaggcctgaggtgacgggcaacatgcccatgcagaagatcttcatgaccagt
gagaaccaggagcaggtgaaagagctgctgagagagctgcagacccaggactatgacgat
gagccctatgaggaagaagaagactatgaggaagaggaagaggaggaagagtatgatgaa
ctggattacagggatgaagggcagttctggaccacccatgatgacccggtagagagcaca
gagagccctgtctgtgatcctgattcagaagaagaccgacggccctccccccagccagtc
attggactgtttgccataggaaaactctgcaggtatggttttgaccgggagcgcagcagg
caggccctggagacgggtgttggggaggtgggagccaccttggaacagctgctccttcag
gtgttctcagagcgctaccgccctgaagctatatcccctggtggcctccagggggcgccc
atggacgagtgccttacacagagacaggaggaggccctggccctcactgccatctatggt
gaccgtttcactgagcgcattgcaaacagtgtgtggactgtcactctggaccccgacttc
ctagctggcattgcggggaggaatcgtaaggcagacgctcctaccaatggccctgttcac
attcgggacgtctgccgcttctacctcaagggtgccggctgcaggtttggagccaagtgc
aaatataagcaccagatgcctactgaggagaatgcctcaggtccccgggaaccggtgggt
gccagccagcctgggttcagcagctactcctctccagaatacgagatggaggtccgcttc
cccaaagggaaccgctaccccttccaggctcccatagtggcattcagcactaacgatgag
gccataggggccgcggcaaggctaagtgtcacagagcatctgttcggagaggccttggct
gcagcgaaggaaggggagccagtggtctacaccttgatcacatgctgtgaggacgaggcc
acaatgaaagagttgctgtcagtcacccatcataaatacagctccccgccccctgtaata
gtggctccgccccccattgccatgtcaaagagcagaggtgggaggagtaacgcatcacgt
gaggagaccaagtgtaatatgaacactagcagtaacccaagcaccaacagcagaacggcc
ccaaataacaacagcactggcaacagcagaacggccccaaataacaacagcactggcaac
agcagaacggccccaaataacaacagcactggcaacagcagaactgccccaaataacaac
agcactggcaacagcagaactgccccaaataacaacagcactggcaacagcagaactgtt
cctactagcaggaacagcacctacagaccactgcaggccactgaagatttggaagacgat
gaggatgaggaggaagaggaggacgtggtagttcctgagaccgagagctatgtcaacttg
aggaagaagatggtgaaaaggcatgaagagaggacagatgcccggcagcaggaaaacgag
aagctgtgtagagagttcaggaaaaaaaagtcatccaggcgcttcgcctccatgctgcag
cagagacaaaagctgccagcctggcatgagaaggagaacatcctggacctgctggacacc
tgtcaggtgctggtggtcagtggcatgactgggtgtggtaagaccacccagatcccccag
ttcattctggatgcctcactgaccggacctgctgaacaggtggcaaacatcatctgcacc
cagccacgccgtatctccgccatcaccgtagccgagagggttgcacaggagcgggcggaa
cgcctcggtaactccgtgggctaccagatccgcctggagactgtcaggtccgctgctacc
aggctactgtactgtaccaccggggtgttgctgaggaggctggagggggaggccgacctc
gcggggatctctcatgtcatcgtggatgaggtccacgagcgcacggaggagagtgacttc
ctgttgctggttttgaaagatctgatggcacagaggccagacctgaagatcattctgatg
agtgccaccctcaacgctgacctcttctcccactacttccacaactgtaacaccatccac
ataccaggacgcactttccccgtagaccaatttttcctagaagatgccattgccaaaacc
cggtacgtgattgaagatggcagtccgttcatgcgctcaggcggggggaaggacaagtcg
tcttgggggggcagaggggcggctaaagagcccgtggaccagctcggggatgacatgtgg
tccttcatgaacctacagaagaaagactttgtcaaagactcaatccctgatcagcagctc
ggtcttcaggagctcacggtccggtacaaagacacaaagatgtcggttctgaagaccatc
gctgccatggacctggataagatcaacatggacctggttgagaacctgctggagtatatt
gtggacggtaaccatggctatcctccaggtgctgtgctggtgttcatgccgggcctggca
gagattaaggccctctacgaacagctccagtccaacaggatgttcaacaacaggaagaga
accaggtgtgtggtgtaccccctacactcgtccctgtccaacgaggagcagcaggcggtg
ttcagccggccgccagacggagtcaccaagatcatcatctccaccaacatcgccgaaacc
tccgtcaccatcgacgacgtggtgtacgtggtggactctggcaagatgaaggagaagagt
tacgatgcctctaagagcatggagagcctggaggagacgtgggtgtcgcgtgccaacgcc
ctgcagaggaggggccgtgcgggccgcgtggcctctggggtctgcttccacctgttcacc
agccactgcttccaacaccatctggctgagcagcagctgccggagatccagagagtcccc
ctggagcagctctgcctcaggattaagatcctggatgtgtttgcagagcgcacgttggag
tctgtcttctgccggctcatcgagcccccggccacgggcagcctggacgcagccaagcag
cgtctgcaggacctgggggctctgaccgccgacgagaagctcacccctctgggctaccac
ctcgcctgtctgcccgtggacgtccgcattggcaaactcatgctgttcggggccatcttc
cgctgcctggaccctgccctcaccattgctgccagcctggccttcaaatcccccttcgtg
tctccgtgggataagagagaagaggccaatgagaagaagctgaattttgccttggccaac
agtgaccatctggccctgctgcaggcatacaagggctggtgtaaggcagcccggaacggg
aaccagacgggctaccagtactgcagagagaacttcctgtccagtcggggattacaggag
attgccagtctgaagaggcagttcacagagctgctttctgacattggcttcgtcaaggag
gggctgaaggccagagtcattgaaagaatggccaccaaagggaccgacggtgtcgtggag
gctaccggccgcgaggccaacctcaactctgacaacatcaggttaatgtctgcaatgctc
tgtgctgccctctatcccaatgtagtccaggtgagatcacctcatgagaagttcaagcag
actagtaaaggagctgtgaagatgcagcccaaagcagacgagctgcgctacatgacgaag
aacgacggctgtgtccacgtacacccgtcctctgtcaactacacagtgcgccactacgac
agcccctacctggtctatcatgagaaggtgaagacgagccgtgtgttcatccgggattgc
agcatggtgtccgtgtatcctctcgtgctgttcggagggggacaggtcagcgtggagcta
cagaagggggagttcgtcatctccctggatgacggctggatccgattcgccgcagcgtca
caccaggtggcggagctggtgaaggagttgcgctgggagctggatcagcttctggaagat
aagatcaggaaccccagcatagatctgtgtacctgcccacgaggatcccgaatcatccac
gtgatcgtgaagctcattagcacccagtaa
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integrated database retrieval system
