Esox lucius (northern pike): 105006947
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Entry
105006947 CDS
T04894
Name
(RefSeq) serine/arginine-rich splicing factor 1B-like
KO
K12890
serine/arginine-rich splicing factor 1
Organism
els
Esox lucius (northern pike)
Pathway
els03040
Spliceosome
els05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
els00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105006947
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
105006947
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
els03041
]
105006947
Spliceosome [BR:
els03041
]
Common components
Common spliceosomal components
SR proteins
105006947
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_3
RRM_7
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
105006947
NCBI-ProteinID:
XP_010863990
UniProt:
A0AAY5KDL7
LinkDB
All DBs
Position
LG07:1130905..1136627
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AA seq
255 aa
AA seq
DB search
MSGDNMSGGGSVVRGPAGNNDCRIYVGNLPPDIRTKDVEDVFYKYGAIRDIDLKNRRGGP
PFAFVEFEDPRDADDAVHGRDGYDYDGYRLRVEFPRSGRGGGRGGGGGGRGGGDGGAPRG
RYGPPSRRSEYRVIVSGLPPSGSWQDLKDHMREAGDVCYADVFRDGTGVVEFVRKEDMTY
AVRKLDNTKFRSHEGETAYVRVKVDGPRSPSYGRSRSRSRSNGRSNSRSRSFSPPRRSRA
SPRYSPRHSRSRSRS
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggagataacatgtcgggtggcgggagcgtggttcgcggcccagcgggaaacaac
gactgtcggatatatgtgggcaatctgccccctgatattcgtactaaagacgtggaggat
gtgttttataaatacggggcgatccgagacattgatttgaagaaccggagagggggacca
ccgttcgcctttgttgaatttgaggaccccagggatgctgatgatgccgtgcacggtcgg
gatggttacgactacgatggttaccgtctccgggtagagttcccccggagtgggcgtggc
ggaggacgtgggggtggtggtggtggcaggggcggaggagatggaggtgccccaagagga
cgctatggacccccgtcaaggcgctctgagtacagggtcattgtctcaggactccctcca
agcggtagctggcaggacctgaaggatcacatgcgcgaggcgggcgatgtgtgttatgca
gatgtgttccgggatggaaccggcgttgtggagttcgtacgcaaggaggacatgacatat
gcggtccgcaagctggacaacaccaagttccgctctcacgagggggagacggcgtacgtc
cgtgtgaaggtggacggacctcgcagccccagctatggacggtcccgctctcgtagccgt
agcaacgggcgtagcaacagccgttcacgcagcttctctccaccgcgacgcagccgggcc
tctccacgctactcgccccgtcattcacgctcccgctcacgctcctag
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