Esox lucius (northern pike): 105007103
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Entry
105007103 CDS
T04894
Name
(RefSeq) transient receptor potential cation channel subfamily M member 1 isoform X1
KO
K04976
transient receptor potential cation channel subfamily M member 1
Organism
els
Esox lucius (northern pike)
Brite
KEGG Orthology (KO) [BR:
els00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
els04040
]
105007103
Ion channels [BR:
els04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
105007103
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
LSDAT_euk
TRPM2
TRPM_tetra
LSDAT_prok
Ion_trans
Glutaredoxin2_C
BEN
Motif
Other DBs
NCBI-GeneID:
105007103
NCBI-ProteinID:
XP_028971064
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All DBs
Position
LG19:621124..677717
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AA seq
1793 aa
AA seq
DB search
MCGQLTTQHVITPIGPLTNKTSEENHQLVQIEPVQQQERWSVAKHTQTFPTDAFGTIEFQ
GGGFINKAMYIRVSHDSKPDNLLHLMVKDWQLELPTLLISVHGGLQNFELQPKLKQVFGK
GLIKAAVTTGAWIFTGGVSTGVIRHVGDALKDHSSKSRGKVCAIGIAPWGIIENKEDLIG
KDVTRPYQTMSNPLSKLSVLNNSHSHFILADNGTTGKYGAEVKLRRQLEKHISLQKINSR
LGQGVPLVCLIVEGGPNVISIVLESLREDPSVPVVICDGSGRASDILSFAHKYSEEAGLI
NDDVRDQLLVTIQKTFNYSKSQSHQILLMVMECMKKKELITVFRMGSEGQQDIEMAILTA
LLKGTNASAPDQLSLALAWNRVDIARNQIFVYGHHLPPASALVNSGGATSSMERQKSPGS
APRNKTKKKGKGGKAKPEPPEETDPRKIEIMQWVNSLEQAMMDALVLDRVDFVKLLIENG
VNIHHFLTIPRLEELYNTRLGPTNTLHVVVRDIKKGNLPPDYQITLIDIGLVMEYLMGGA
YRCKYTRKNFRTLYNNLYGLKRPKALKMLGLEDDEPRGKKKKGKKKKEEEVEIDVDDPEV
SRFTYPFHELMVWAVLMKRQKMALFLWQRGEEAMAKALVACKLYIAMAKESSESELVDDI
AQDLDNNSKEFGQLAYELLDQSYKHDEQVAMKLLTYELTNWSNSTCLKLAVAAKHREFIA
HTCSQMLLTDMWMGNLRMGKSPGLKVILGIIFPPSILLLVDFKGEDQSYSATDSDEGKDK
DDDKSGKDDTMSKKGDEEQGNSKVKRKPIGRRIYEFYDAPFTKFWFNTISYLGYLMLYNY
IILVKMERWPSIQEWTVIAYILTLGFEKVRQILMSEPGKLKQKVNVWLEEYWNITDLAAI
STFLIGLLLRLQNEPLLGIGRVIYCIDIIFWYIRVLDIFGVNKYLGPYVMMIGKMMIDML
YFVVIMLVVLMSFGVARQAILHPDEEPTWRLARNIFYMPYWMIYGEVFADSIDLYAMEIN
PPCGDNLYDEDGKKLPPCIPGAWLTPAIMACYLLVANILLVNLLIAVFNNTFLEVKSISN
QVWKFQRYQLIMIFHDRPLLPPPLIVFSHLYLLISRVSGRCSNKKNEGEPDEKDRGLKLR
LNPEELKALYEFEEQCVEEYFKEKEDEHESSTNERIKVTSERVENMSMRLEEVNERENTM
KASLQTVDLRLAQLEDIHSRMANALEKLAGVDQSELKRSHSTRSSNCDTSTLFRASSINS
VDGYSMYRFQMDVDEQNQREAERKAQLGPERQGSIMSGLGSERQSSIMSGLGSERQGSIM
SGLGSERQGSLQKGCSSSTLTVGPERHGSLHARTSRDCGRTLGLDNKMRPSSYVDILISP
CEQRVEGETTGVEDLIDTPKECPYLRDPLDSALAKAGLSGEKPKLEKYTSVEWVSTEPED
TFPTSRERSKTTIIYDRAEARDKGVWVADYTPKPEALDTTDTLHAALAKSGLPRLKPKLV
ATISSPQENIVHANICYSTEPPATPQSTRPRAKSMVLYSTATAGEDTEVEDYNRLMDKVA
QSPGLWGYRVQPRASVVSSAQLLKTQTVSEPELQEPQEFPKNIETVMVPTLSKTLLVPSE
SLLFPLGYSPADQQLVPADTASPPSTELDPPGPTLVPLVQTLILPTIEIDEDQTMFQQAT
DIEGNPHQGYLMVGEDDRMFPQRSKTWNSSTWKGKSLGDSRARLRGASSYTDIVGAYGTT
VEDEKEEKTEEKAGGDWVERDERTEGRKEKEKEHGREQGGGEGKERAESQVTI
NT seq
5382 nt
NT seq
+upstream
nt +downstream
nt
atgtgtggtcagctgacgacacagcatgtgatcacccctatcggccctctgaccaacaag
acatccgaggaaaaccaccagctggtccagatagagccagtccagcagcaggagaggtgg
tctgtggccaaacatactcagaccttccccacggatgcctttgggaccatcgagttccag
ggtgggggatttatcaacaaggccatgtacatcagagtatcccatgactccaagcctgac
aacctgctccatctgatggtgaaagactggcagctcgaactccccaccctgctcatctcg
gtccacggggggctgcagaactttgaactgcagcccaaactcaaacaggtgtttgggaag
ggcctcatcaaggctgctgtcaccaccggagcatggatcttcaccggcggagtcagcact
ggtgtgatccgccacgtaggggacgccctgaaggaccactcctccaagtccagagggaag
gtgtgtgccatcggcatcgctccctgggggatcatagagaacaaagaggatctgatcggc
aaggatgtaacacggccgtaccagaccatgtccaacccgctgtctaagctgtctgtcctc
aacaacagccactcccacttcatcctggctgacaacgggactactggaaagtacggtgcg
gaggtgaagcttcgccgccagctggagaaacacatctcattgcagaaaatcaactcacga
ctcggccagggagtaccgttagtgtgcctcattgtagagggaggtcccaatgtgatctcc
attgtcctggagagcctcagggaggacccctctgtgcctgtggtcatctgtgacggcagc
ggacgagcctctgacatcttgtcattcgctcacaaatacagcgaagaggcaggtctgata
aatgatgatgtgagggaccagctgttggtgaccatccagaagacatttaactacagcaag
agccaatcacatcagatcctcctcatggtcatggagtgcatgaagaagaaagagctgatt
actgtgtttcgaatgggttctgaaggacagcaagatatagaaatggcaattctgactgct
ttactaaaaggaaccaatgcctcagccccagaccaactgagtctagctctggcctggaac
agagtagacatcgcacgcaaccaaatctttgtatacggacaccatctaccacctgccagc
gccctggtcaactccggtggagcaactagcagcatggagcggcagaagagcccgggctct
gcccccagaaacaaaactaagaagaaagggaagggagggaaggccaagcctgaaccccca
gaagaaacggaccccaggaagatagaaatcatgcaatgggtgaactccctggagcaggcc
atgatggacgccctggtgctggaccgggtggactttgtcaagctgctgatagagaacgga
gtcaacatccaccatttcctcaccatccctcgtctggaggaactctacaacactagactg
ggtcctaccaacacactgcacgttgtcgtcagggacatcaagaagggaaatcttccacca
gattaccagatcactctgattgacattggtctggtgatggagtacctgatggggggggct
taccgctgtaaatacaccagaaagaacttcaggacgctctacaataacctgtacgggttg
aagaggccaaaagccttaaagatgctggggttggaggacgatgagccaagggggaagaag
aagaaagggaagaagaagaaagaggaggaagtggagatcgatgtggacgacccggaggtc
tcccgtttcacttacccattccacgagctaatggtgtgggcagtcctcatgaagcgccag
aagatggcgctgttcctgtggcagcgcggagaagaggccatggccaaggccctggtggcc
tgcaagctgtacatcgccatggcaaaggagtcgtctgagagcgaactggtggacgacatc
gcccaggacctggacaacaactccaaggagtttggccagctggcttatgagctcctggac
cagtcctataagcacgatgagcaggtggccatgaagctgttgacctatgaactgacaaac
tggagtaactccacctgcctgaagctagctgtagccgccaagcacagagaatttatcgcc
cacacctgcagtcagatgctactgacagatatgtggatggggaacctaaggatgggcaag
agcccagggctgaaggttatactgggcatcatctttccaccatcgattctgctgctggtg
gacttcaaaggagaagaccagtcatactcagccaccgactctgatgaagggaaagacaag
gatgatgacaagtccggcaaggatgacactatgtcgaagaaaggagatgaggaacaaggc
aacagtaaggttaagaggaagccgattggacggaggatctatgagttctatgacgctcca
ttcactaagttctggttcaacactatctcctacctgggatatctgatgctgtataactat
atcatcctggtcaagatggaacgatggccctccattcaggagtggactgtcatcgcctac
atcctcacgcttggcttcgagaaagtcagacagattctgatgtcagagccggggaagctg
aagcagaaggtcaacgtgtggctggaggagtactggaacatcacagacttggcggccatc
tccaccttcctgattggtctgctgcttcggctgcagaacgagcccctcctgggcatcggc
cgtgtcatctactgcatcgacatcattttctggtacatcagggtccttgacatcttcggg
gtcaacaagtaccttggaccttacgtcatgatgattggaaaaatgatgattgacatgcta
tacttcgtggtgatcatgctggtggtgttgatgagttttggggtggcgaggcaggccatc
ctgcaccccgatgaggagccaacatggcgtctggccaggaacatcttctacatgccttat
tggatgatctacggtgaagtgtttgccgactccatcgacctctatgcaatggaaatcaac
cctccatgtggagataacctgtatgatgaggatgggaagaagcttcctccgtgtatccct
ggagcctggttgaccccagccatcatggcctgctatcttctggtggccaacatcctgctg
gtcaacctgctcattgctgtcttcaacaacacttttctggaggtgaagtccatctccaac
caggtgtggaagtttcagagatatcagctcatcatgatcttccacgaccgtcctctcctc
cctcctcccctcattgtgtttagccacctgtacctcctgatcagcagggtctccggtcgc
tgctccaacaagaagaatgagggagaaccggacgagaaggacaggggacttaagctgcgt
ctgaatccggaggagctgaaggccctgtatgagtttgaggagcagtgtgtggaggagtac
tttaaggagaaggaggatgagcatgagtcatccaccaatgagaggattaaggtcacatct
gaacgggtggagaacatgtccatgcgcctggaggaggtaaatgagagggaaaacaccatg
aaagcatctctgcagacggtggaccttcgcctagctcagctagaggacatccacagccgc
atggccaatgccctggagaagctggccggggtcgaccagtcagaacttaaacgttcccac
tccacacgctcttccaactgcgacacgtctaccctcttccgagccagctcgatcaacagt
gttgatggatatagcatgtatcgctttcaaatggacgtggacgaacagaatcagagggag
gctgaaaggaaagcccaacttggccctgagagacaaggcagtataatgtctgggctgggc
tctgagagacagagcagtataatgtctgggctgggctctgagagacaaggcagtataatg
tctgggctgggctctgagagacagggcagtttacagaaaggctgtagttcctctaccctg
actgtgggcccggagagacatggcagcctacatgccaggacctccagggactgtggccgg
actttaggcctggataacaagatgcgtcctagctcctatgtggacatattaatttcccct
tgtgaacagagggttgagggggaaaccactggagttgaggatctgattgacacacctaaa
gaatgcccataccttagagatcccctggattctgcattagccaaagcaggtctatcagga
gagaagcccaagctggagaagtatacgtccgttgaatgggtttcaaccgaacctgaggac
accttccctacatctagagaaaggtctaagaccaccatcatttatgaccgagctgaagca
agggacaagggcgtctgggttgcagactacacccctaaaccagaagcactggacactaca
gatacactgcatgctgcgttagccaaatcaggtctaccgaggctaaagcccaagctggtg
gcaactatttcctctccacaggagaatattgtccatgctaacatatgctactccaccgaa
cccccagccaccccacaatccactaggcccagggctaagagcatggtcctttacagtaca
gccacagcaggggaagacacagaggttgaagactacaaccgtctgatggacaaggtggcc
cagtctccaggcctgtgggggtacagggtccagcccagagcctctgtagttagttctgcc
cagctactaaaaacacagaccgtctctgagcctgaactgcaggaaccacaggagtttcct
aaaaacatagagactgtgatggttccaacactttctaaaactttgctagttccatcagag
tctttgctgtttcctctgggttattcacctgcagaccagcagctagttcctgcagacact
gcctcccctccttcaactgagctggatcctcctggcccaacattggttcctctggttcaa
acactgattcttccaaccatagagattgatgaggaccaaaccatgtttcagcaggctaca
gacatagaaggcaacccccaccaaggctacctgatggtaggtgaggacgataggatgttc
cctcaaagatctaagacctggaacagcagcacctggaaaggaaagagcctgggtgacagc
agggcgcggcttcgaggagctagcagttacacagacatagttggagcatatggaaccaca
gttgaggatgaaaaggaggagaagacagaggagaaggcaggtggggattgggtggagaga
gatgaacgtacagaggggagaaaagagaaagagaaagagcacgggagagaacaaggtggt
ggagaaggaaaagaaagagctgagagtcaggttaccatctga
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integrated database retrieval system
