Esox lucius (northern pike): 105007457
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Entry
105007457 CDS
T04894
Symbol
dhx8
Name
(RefSeq) ATP-dependent RNA helicase DHX8
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
els
Esox lucius (northern pike)
Pathway
els03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
els00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105007457 (dhx8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
els03041
]
105007457 (dhx8)
Enzymes [BR:
els01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
105007457 (dhx8)
Spliceosome [BR:
els03041
]
Complex C
Other components
Step II factors
105007457 (dhx8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
S1
Helicase_C
HA2_N
DEAD
AAA_22
AAA_19
nSTAND3
GIPC1_GH2
T2SSE
AAA_16
PhoH
TsaE
ABC_tran
Flavi_DEAD
Sigma54_activ_2
OB_RRP5_4th
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
105007457
NCBI-ProteinID:
XP_012989345
UniProt:
A0AAY5K9C0
LinkDB
All DBs
Position
LG05:9588151..9597671
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AA seq
1200 aa
AA seq
DB search
MANIGDNELEQLEYLSLVSKVCTELDNHLGISDKDLAEFVISLAEKEPTFDGFKSLLLKN
GAEFTDSLVGNLLRLIQTMRPPPKASSSKVLEPVVKQKNKKEKLKELFPALCRPDDPAPK
AILDEDDVKIADAAMKELEMFMPSVSRSDSKSKSRSDKKKRHSRSRSRSRDRKRRHRSRS
RSRSHSRDRQRDRDRERDRDRSKKRASRWNERSRSPSRDRDLKEGSDRWKDKHVDRPPPE
EPTVGDIFNGKVTSIMQFGCFVQLEGLRKRWEGLVHISELRREGRVANVADVVQKGQRVK
IKVLSFTGSKTSLSMKDVDQETGEDLNPNRRRNQGPDGEEETKMRNPDRPTNLNLGHAPE
LEDDTLERKRLTKISDPEKWEIKQMIAANVLSKEEFPDFDEETGILPKVDDEEDEDLEIE
LVEEEPPFLRGHTKQSMDMSPVKIVKNPDGSLSQAAMMQSALAKERREVKQAQREAEMDS
IPMGLNKHWVDPLPDVDGRQIAANMRGIGMMPTDIPEWKKHAFGGNKASYGKKTQMSILE
QRESLPIYKLKEQLIQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTTRGKIGCTQPRR
VAAMSVAKRVSEEYGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLIDPDLGQYA
IIMLDEAHERTIHTDVLFGLLKKTVQKRTDMKLIVTSATLDAVKFSQYFYEAPIFTIPGR
TYPVEVLYTKEPETDYLDASLITVMQIHLTEPPGDVLVFLTGQEEIDTACEILYERMKSL
GPDVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFV
KQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKTYRLYTERAYRDEMLTTNVPEI
QRTNLASTVLSLKAMGINDLLSFDFMDAPPMETLITAMEQLYTLGSLDDEGLLTRLGRRM
AEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQNVFYRPKDKQALADQKKAKFHQAEG
DHLTLLAVYNSWKNNKFSNPWCYENFIQARSLRRAQDIRKQMLGIMDRHKLDVVSCGKAT
VRVQKAICSGFFRNAAKKDPQEGYRTLIDQQVVYIHPSSALFNRQPEWVVYHELVLTTKE
YMREVTTIDPRWLVEFSPAFFKVSDPTRLSKQKKQQRLEPLYNRYEEPNAWRISRAFRRR
NT seq
3603 nt
NT seq
+upstream
nt +downstream
nt
atggcaaacatcggagataatgagctggaacagctcgaatacctttcgttggtgtccaaa
gtgtgcacagaacttgacaaccacctggggataagcgataaagatctagccgaatttgtc
atcagccttgccgaaaaggaaccaacatttgacggcttcaagtcacttctattgaaaaat
ggagctgaatttacagattcactcgtcggcaatttgctcagacttattcagacgatgcga
cctccaccaaaggcatcttctagcaaagtccttgaacctgtggtcaaacagaagaataag
aaggaaaaactgaaagagttgtttcctgcattatgccggccagatgatcctgctcccaag
gcaatactagatgaagacgatgtgaagattgcagacgccgccatgaaggagttagagatg
ttcatgcccagtgtaagtcgctcagactcaaagagcaagagcaggtcggacaaaaagaag
cgtcacagcagaagtcgaagcagaagccgggacaggaagagacggcaccgctctcggtcg
cgctctcggtctcactccagggaccgccagagagaccgtgaccgcgagagggaccgggat
cgtagcaagaaacgtgcatctcgctggaacgagcgcagccgctcccccagccgggacagg
gacctcaaggaaggctcagaccggtggaaggacaaacacgtggaccggcctccaccagag
gagcctaccgtgggggacatcttcaatggcaaagtcaccagcatcatgcagtttggctgc
ttcgtgcagctggagggcctgaggaaacgatgggagggcttggtccacatctccgagcta
cgcagagagggacgtgttgccaatgtggccgatgtggtccagaaaggccaaagggtcaag
atcaaggtgctgtctttcaccggctctaagaccagtctcagcatgaaggatgtggaccag
gaaacaggggaggacctgaaccccaatcggaggagaaaccagggtccagatggtgaggag
gagacaaagatgaggaaccctgatcgcccaaccaacctcaacctgggccacgcccccgag
ttagaggacgacacactggagcgtaagaggctcaccaagatatcagaccctgagaagtgg
gagatcaaacagatgattgccgccaacgttctttctaaagaggagttccccgactttgat
gaggagaccggtatcctacccaaagtagacgacgaagaagatgaggacctagagatcgaa
ctggtggaggaggagcccccgttccttagggggcacactaaacagagtatggacatgagc
cccgtgaagattgtcaagaatccggacggctccctgtcccaggcggccatgatgcagagt
gctttagctaaggagaggagggaggtgaagcaggctcagcgagaggccgagatggactcc
attcccatgggccttaacaagcattgggtggacccccttcctgacgttgacggtaggcag
attgcggccaacatgagaggcatcggcatgatgccgaccgacatcccggagtggaaaaaa
catgcctttgggggcaacaaggcctcttacggcaagaagacacaaatgtccatcctggag
cagagggaaagcctgcccatctacaagctcaaggagcaactcatacaggccgtccatgat
aatcagatcctgattgtgatcggggagacgggctccgggaagaccacccagatcacccag
taccttgccgaggcgggctacaccactcgggggaagatcggctgcacccagcctcgtcgt
gtggcggccatgtctgtagccaagagagtgtctgaggagtacggttgttgtctgggccag
gaggtagggtacaccatccgttttgaggactgcaccagccctgagacggtgatcaagtac
atgacggacggtatgttgctgagggagtgtctgattgacccggacctgggccagtatgcc
atcatcatgttggacgaggcccacgagaggaccatccacactgacgtgcttttcggtttg
ctcaaaaagacagtgcagaaacgcacagacatgaagcttattgtgacttcggccacgcta
gacgctgtcaagttttcccaatacttctacgaagcgcccatcttcaccatcccaggacgt
acctatccagtggaggtgctttacacaaaagagcccgagacggactacctggatgccagt
ctcatcactgtcatgcagatccacctcaccgaacccccaggcgacgtcctggtgtttttg
acgggtcaggaggagattgacacagcctgtgagatcttgtatgagcggatgaagtccctg
ggaccggatgtgcctgaactcatcatcctgccagtgtactcagcccttcccagcgagatg
cagacccgtattttcgaccctgctccgcccggcagcagaaaggtcgtcattgccactaac
attgccgagacgtctctgaccattgacggtatctactatgtggtggacccaggcttcgtg
aagcaaaaggtctacaactccaagactggtatcgaccagctggtggtgacccctatctca
caggcccaagccaagcagcgggctggtagagctggaagaaccgggccggggaagacctac
aggctttacacagagagagcttacagagacgagatgctcaccacaaacgtgcctgagatc
cagagaactaacctggccagcactgtgctgtcactcaaggccatgggcatcaatgacctt
ctgtcctttgacttcatggacgctcctcctatggagacactgatcacagccatggagcag
ctctacactctgggctctctggacgatgaagggttactcactcgcctcggacgccggatg
gccgagttccccctggagcccatgctgtgtaagatgctgatcatgtcagtccacctggga
tgcagcgaggagatgctcaccatcgtctccatgttgtctgtgcagaacgtgttctaccgg
cccaaggacaaacaggccctggctgaccagaagaaggccaagttccaccaggctgaagga
gaccatctcaccctgctggctgtctataactcttggaagaacaacaagttctccaaccca
tggtgctatgagaactttattcaagcccgctcactgcgcagagcccaggacatccgcaaa
cagatgctgggcatcatggacagacataaactggacgtggtctcctgtggaaaggccacg
gtgcgtgtacagaaagccatctgcagtggtttcttccggaacgcggccaaaaaggatccc
caggagggctaccgtaccctcattgaccagcaggtggtgtacatccacccctccagtgcc
ctgttcaaccgccagccggagtgggtggtgtaccatgaactggtgctgactacaaaggag
tacatgcgggaggtgaccaccatcgacccgcgctggctagtggagttctcgccggccttc
ttcaaggtgtctgacccaactcgcctcagcaagcagaagaaacagcagcgcctcgagcca
ctctacaaccgctacgaagagccgaacgcttggagaatctcccgggccttccgtcggcgc
tag
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integrated database retrieval system
