Esox lucius (northern pike): 105007503
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Entry
105007503 CDS
T04894
Symbol
brca2
Name
(RefSeq) breast cancer type 2 susceptibility protein isoform X1
KO
K08775
breast cancer 2 susceptibility protein
Organism
els
Esox lucius (northern pike)
Pathway
els03440
Homologous recombination
els03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
els00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
105007503 (brca2)
03460 Fanconi anemia pathway
105007503 (brca2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
els04121
]
105007503 (brca2)
03036 Chromosome and associated proteins [BR:
els03036
]
105007503 (brca2)
03400 DNA repair and recombination proteins [BR:
els03400
]
105007503 (brca2)
Ubiquitin system [BR:
els04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
105007503 (brca2)
Chromosome and associated proteins [BR:
els03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
105007503 (brca2)
DNA repair and recombination proteins [BR:
els03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
105007503 (brca2)
FA (Fanconi anemia) pathway
Downstream FA components
105007503 (brca2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCA-2_helical
BRCA-2_OB3
BRCA-2_OB1
BRCA2
BRCA2DBD_OB2
Tower
BRCA2_TR2
Motif
Other DBs
NCBI-GeneID:
105007503
NCBI-ProteinID:
XP_019903530
LinkDB
All DBs
Position
LG01:complement(42364791..42430798)
Genome browser
AA seq
2928 aa
AA seq
DB search
MDARRNIFDSVKDQIWQDLGPLDPNWFEELTVKASSKDQGDTEREHSSTAKSCGQDGSFK
ILSTLDSSDMFSTPKVFRHRRLQSPESLIDKEPFPPDQVCCSGTSGTGITDTSPCLFGTS
VGSETSSKPCRTTSYGEHFGLLDMPNQMAHSAKRISESLGAELDADISWTSSLNTPVMSP
TIILTKSVESRPLCPVKPSAGDQVMFVRNLFPSLSKESESAIPSLEINNRPLGQQVGRDG
QLTGVFEMSVGSQDTLPGDESGLWKQTIPNVFEDREIRSTVASVLDGAEDVLSMFFSNSS
LALRRVRAKERIKRKQSVSTRLSSIKEHIPTDNMEHEKVSCKRGREYSDTSATSESRTDI
KSGDLGISQWTPISLSEISDFMDTFHYEGTSSMKHIIAHGAMDCAFLDSTGSLQPEPGSS
KRTVLVESALSRKTVQGSSHPDGFQLKRSAVGSSPEHTFARKTRTFVYGVQNQPSSEQGK
HSVSQMLLTSHVTPPKGNNQNIRNNETIPNKQELNTGNLKNTGMDGNNQLVHQESATDKK
IFSQAPTKDPVFDMSQLCKAFAQDFSQAVEFSKPCSRREEAIQNGFSASAGLSTVKQTKR
KLLTKLESGPKTPNYVTSDVMHTTNITKVTDTSVLKQALSCETGSPPTTEMNFISPLNGA
TVSKQSSVKFNGQVCVPCGSVSGFLQPDCGFKTNSKMKIHISSASLEKAKKRFKQIDDER
VAVNCSGIGLNEEGNMSSGLMLVDESCLHPDPYTHKMTFESKGLLTASQRADVSELCSLL
EDADSQFEFTQFKSAKHTTFVSTASSDKDLDPDLLTGIDFNDSFNSDIEKQSLKMVTPEK
NTIVSQCKRICQVTSSDNKSLPISSTEKPIEHVLLKRALSIHSSSSEKIAKSSFGLLTKN
TTRKHLDNMKKNTSEKQSDSKHLKCGISFKTAEGNAMAVSEKCLSKAKALFADLEEVNET
NTNACAVKNTEQVEASPVKCKSEIDSNNKISSFTSNNKNSYEKKGDVNELCDKYIDKMEV
NFTNSHKHTDDDDFQTASAKAGTISDCASKEQKNKCGFTTARGKRVYVSPASLLKARTLL
NDCDELDNSKPGKIPSLYANISIQNIKQKSYFGFQKPCSKAAKIPMTAENELNRGGTSHD
IRGQENKMLELDNSQINVNNSLQNGCDFCTASGERECVPYGALLKAEALFSDCNVDGEEL
SKSMLRVDCTIPIQNSLQKQNGFKCVNGKGVTVSTKALQHAMECNTIVNAEINQENWAAK
PTDVVVINSEKSNCGFMTAGGQKVVSEKGLLKARSILNDNLDENCPYLEKGFTKESSLFE
ASKWKSTDDLNTDCHTNLIHELPVKHGQFRTASGKGVIVSTKALQQAKGIFTDCDFIVNA
DAKPQNSPEKHPDIQMNNQEKSSCGFITAGGKKLHVSEKCILKARSILNENLDNCKYLEK
GFTNNSSLFEPSQWKSKDQPEIHCEFKSASGKGVTLSVKALQQVKALFNDCNSNMDSLIS
AAATQENSEIKSADSLINSLGKSYCAFMTAGGKNVHISDKGILKAKSILYENLDDSCTNA
IENVWVSNRVPLLTEDGTDIKHGARNKSNSSGICGVEKSCDWALQKPESLLNEWEVVEYA
EFENGLKVDVENIPIKEQNQISSFSTTHGNEVSVSEKGFEDVKFAYSPSGSGDNPVRSPC
FSTASGKSVSVSENALQEPSANFKECVDDTLACYTNLHKSPEEKRRLKVPNPTIHSQCEL
VKDPKVIQTSVKVLHLSSLGVCKESSLSNLESLGLSSCSVTQKSCFAKKAMDCPKALLEA
EDLTNQSPRLPEQARPMSCKGTFPVRSGTGKRQAADVKIRDEPPLKRRLLDEFDRTVDCN
RRSSFSQVKSSSDGTFKDRRVFKYNVALQPNVTRQYRKLRLVAPRLNKNEPQITSDSTTK
DIKPVSSKTIVFVPPFWKNIHPEPQRSSGCQDKAKASVVFVPPFRKGNHETTEGFSKSSS
EDKTSPLVFERGLHTESSVPLPEYNHIPVNDTSYDKANKSVPELNQQRIEKTEAGRDGWS
RRGVEAGTAKESKYCQPAPNCTDVAQDTQCLQLARDMQDIRIRKKMRQTIRPLPGSLYLA
KTSGLARGTLRNAVRGQHPEQHTVEQLFGYGVHLHVAEISSENAEAFRFVCRHHFSSKAF
IEGRLQLGDGAWLIPRDDGTAGKYEFYRALCDSPGVDPKLISEDWVFNHYRWVVWKKACM
ERAFPQVMGSLCLTPEQVLLQLKYRYDVEVDHSRRSALRKIMERDDNAAKTMVLCVCGIV
TKGHNPTRLSWSETKTPQSAAESSPVAVILLTDGWYAIKTQLDFPLTAMLHRGRLRVGGK
LVVHGAELVGSQDACSPLEAPDSLMLKIRANSTRVARWDIRLGFYRDPRPFLLPLSSLYS
SGGPVGCVDIVVLRSYPTQWMEKKLDGGFVFRSQRAEETEQQRHEQAENRAREILCAKIQ
AQIEKEEDAGWDKPRSRKRTLCSRDIEKLLDGEELFEAVENDPVYLETCLSEQQREALKK
YRQCVCERRQTALQERIRQAVEAEGCPVRKVSPVWKLCVADSRAQPCKNVYMLNIWNPSQ
DIQSLLKEGCRYKVYQLSTSEGKKLACNTTIQFTATKKTQFQNIQASAEWLCECFQAREV
VAFCSLLNPDFQPLCGELDLVGYIILITERQGYSPVVYLVDDQLDFVKVRCFSSLAQQGL
EELVKPRALVALTNLQHRTQHSSPICSSIPSLYASDLAMFSTNPKEPHLKEAAAKLRKRV
QEQENFFRIAEEKLSKLGHVPSLALPPRTLGLKADAKPDTRTITPHRFVQNTGPFTPLNR
VGRNPPTCFSGGDNNKDSKTLKRKRGLDYLCIPTHPPLSPLGTMALLSPRISKTFNPPRR
AETPRILKTAQAPTPRSVFKPFEDEWVDDEELAMIDTQALHDGVQTDT
NT seq
8787 nt
NT seq
+upstream
nt +downstream
nt
atggacgccaggagaaatatttttgactctgtcaaagatcaaatatggcaagatttggga
cctctggacccaaactggtttgaggaactaactgtgaaagcttccagcaaggatcagggt
gatactgagagagagcattccagcactgcaaaatcatgtggacaagatggaagtttcaaa
atactttctaccctggatagtagtgatatgttctctaccccaaaggtcttcaggcacaga
agactgcagtctcctgagtcattgatagataaggaaccttttcctcctgatcaagtttgc
tgctcaggaacctctggaaccggaataacagacacaagcccttgcttatttggaacatca
gtaggcagtgagacttccagtaaaccatgtagaacaacttcgtatggagaacattttggg
ctgcttgacatgccgaaccaaatggcacactctgcaaaacgtatttctgaaagtctgggt
gcagagttagacgctgatatttcctggaccagttctcttaacacacctgttatgtcaccc
acaattattttaactaaaagtgtggaaagtcgacctctttgcccagtaaaaccttctgct
ggagaccaggttatgtttgtgcgaaatcttttcccctcgctctccaaggagtctgaaagt
gcgataccatcactagaaataaataatagacctcttggtcaacaagttggacgagatggc
cagttaacaggtgtgtttgaaatgtccgttggctcacaagacacactacctggtgacgaa
agcggcctttggaaacagaccataccaaatgtctttgaggatagagaaatccgcagcact
gtggccagtgtcctagatggagctgaagatgtcctgtctatgttcttcagcaacagcagt
ttggctttacgaagggttagggctaaggagagaatcaaaagaaagcaaagtgtctcaacc
aggttgagctcaattaaggagcacatacctactgataatatggaacatgaaaaagtgtct
tgcaagagaggaagagaatacagtgacacaagtgctacttcagagtccaggactgacata
aaatctggggatttggggatttctcagtggactccaattagcctatctgaaatatctgac
tttatggatacctttcactatgaagggacttcatctatgaagcacataattgcacatggt
gctatggattgcgctttccttgactctactggaagcctgcagccggaacctggttcctct
aaacggactgtccttgtggagtctgcgctttcgaggaaaactgtccaaggctccagccat
ccagatgggtttcagttgaaacgttctgctgttggaagctctcctgaacacactttcgcc
aggaaaacaagaacatttgtttacggtgtccaaaatcaaccttcgtcagaacaaggaaaa
cattctgtttctcagatgttacttacctcccatgtcactcctcccaaaggtaacaatcag
aacataagaaataatgaaaccataccaaataaacaagagttaaatactggtaatcttaaa
aatactggcatggatgggaacaatcagctagtacaccaggaaagtgcaactgataaaaag
attttttctcaagccccgaccaaggaccctgtttttgatatgtcacagctttgcaaggca
tttgcacaagattttagtcaagcagtggaatttagtaaaccatgcagccgaagagaagaa
gctattcaaaatggcttctccgcatcagccggtctctcaacagtgaaacaaactaaaaga
aaactgttgactaaactagaatctggccccaaaactcctaactatgtcaccagtgatgta
atgcatactacaaacattacaaaagttactgacaccagtgtattgaaacaggcattatct
tgtgaaacaggaagtccaccgaccactgaaatgaacttcattagtccactcaacggtgcc
acagtgtcaaaacaatccagtgtgaaattcaatggtcaagtttgtgttccatgtggcagt
gtttcaggtttcttgcaacctgactgtggtttcaaaaccaactcgaaaatgaagatacac
atttcttctgcaagtctggagaaagccaaaaaacggtttaagcaaattgacgatgaaaga
gtggcagtcaactgctcgggcataggccttaatgaggaaggtaatatgtcatctggatta
atgcttgttgatgaatcatgtttacatcctgacccctacacacacaagatgacttttgag
agcaaaggtctgttgactgcctcacagagagctgatgtatcagaactatgcagtcttttg
gaagatgcagacagccaatttgagtttacacaatttaaatcagccaagcatactactttt
gtctcaacagcgtcatcagacaaagacttggatccggaccttctcactggcatagatttc
aatgacagtttcaactctgacatagagaagcaatcattgaagatggtcacccctgaaaaa
aatacaattgtttctcagtgcaagcgaatttgccaagttactagtagtgataataaatca
ttacctatcagttcaactgagaaacccatagaacatgtacttctcaaaagagctctttct
attcacagttctagctctgaaaaaattgctaaaagttcctttggtctgttgacaaaaaac
acaaccagaaaacatctggacaatatgaaaaagaacaccagtgaaaagcagtctgatagc
aaacatcttaaatgtggcataagttttaaaactgctgagggtaatgctatggctgtttca
gagaagtgtctgagcaaagctaaagctttgtttgcagatttggaggaagtaaatgagact
aacactaacgcatgtgcagtgaaaaatacagaacaagttgaagcctcccctgttaaatgt
aaaagtgaaattgattcaaacaacaagattagcagttttacttcaaacaacaaaaacagc
tatgaaaagaaaggtgacgtcaatgaactgtgtgacaaatatattgacaagatggaagta
aattttactaattctcacaaacacactgatgatgatgatttccagactgccagtgcgaaa
gctgggaccatctcagattgtgcatcaaaagagcagaaaaacaagtgtggcttcactact
gctagaggaaaaagagtttatgtttctccagcatctctacttaaggcaaggactctcctg
aatgattgtgacgaattagacaactctaagcctgggaaaatacccagtttatatgcaaat
atatcaattcagaatattaagcagaaaagttactttggatttcagaaaccttgtagcaaa
gcagcaaagattcctatgacagcagaaaatgagttgaacaggggtggcacatcacatgat
attcgaggacaggagaataaaatgcttgaactggataattcccaaattaatgttaacaat
tctttgcaaaatgggtgtgatttttgcactgcgagtggtgagagagagtgtgtcccctat
ggagcactgctcaaagctgaagctctttttagtgattgtaatgtagatggagaggaactt
tctaaatcaatgctcagagtagattgtaccattccaattcagaattcgcttcagaagcaa
aacggatttaagtgtgtcaatggcaagggagtaactgtatcaactaaagctcttcagcac
gcaatggaatgtaataccattgtgaatgctgaaataaaccaggagaattgggctgcaaaa
ccgactgatgttgtggtgatcaactcagaaaaaagcaattgtggctttatgacagctggt
ggacagaaagttgtttcagaaaagggtcttttaaaggcaagaagcattttgaatgacaac
cttgatgaaaattgcccatacttggagaaaggtttcacaaaagaatcaagtttatttgag
gcatctaaatggaaaagtactgatgacctcaacacagattgtcatacgaatctgattcat
gagctgccagtgaagcatggtcaatttaggactgctagtggcaaaggagttatcgtatca
actaaggcccttcagcaagcaaaggggattttcacggactgtgatttcattgtcaatgca
gatgcaaagccgcagaattcacctgaaaaacatcctgatattcagatgaacaaccaagag
aaaagcagttgtggatttataacagctggaggaaagaaattgcatgtttctgaaaaatgt
attttaaaggcaaggagcattctgaatgaaaaccttgataattgcaaatacttggagaaa
ggtttcacaaacaactcaagtttatttgagccatctcaatggaaaagcaaagatcaacca
gagatacattgtgaatttaaatctgctagtggtaagggagtaactttatcagttaaggcc
cttcagcaagtaaaagctcttttcaatgactgtaattccaatatggacagcttaattagt
gctgcagcaacacaagagaattctgaaataaagtctgctgatagtctgatcaacagtcta
gggaaaagctattgtgcattcatgacagcaggcggaaagaacgttcacatctctgataaa
ggtattttgaaggccaagagcattctgtatgaaaacctggatgatagttgcacaaatgcc
attgagaatgtttgggtttcaaatagagttccattactcactgaagatggaacagatatc
aaacatggagcaaggaacaaatcaaattcttctggcatctgtggagtagaaaagagctgt
gattgggcattacagaagccagagtctcttttaaatgaatgggaagtagttgaatatgca
gaatttgagaacggtctaaaagtggatgtggaaaatattccaataaaggaacagaatcaa
atctcaagttttagcacaactcatggaaatgaggtgtcagtttctgaaaagggctttgaa
gatgtgaagtttgcatattctcctagtgggtctggcgataatccagtaagaagcccttgt
tttagcacagccagtggtaaaagtgtgtctgtttcagaaaatgctcttcaagaaccaagt
gctaatttcaaagaatgtgttgatgatacccttgcctgttatactaatcttcacaaaagt
cctgaagagaaaagacgactcaaggtccctaatcccacaattcacagtcagtgtgagctg
gtcaaagaccccaaagtgattcaaaccagtgttaaagtacttcatctgtcttcactggga
gtatgtaaagagtcttccttatcaaacttggagtctctagggctcagtagctgttctgtg
acccagaaaagctgctttgctaaaaaggccatggactgtcccaaggctctgttagaggct
gaagacttgaccaatcagagtcctagactgccagaacaagctcgccccatgtcttgcaag
ggaacttttccggtcagaagtggaaccggcaaaaggcaggcagcggatgtaaagataaga
gacgagccgcctcttaaacgaagactcttggatgaatttgatagaactgtggattgtaat
agacgttcgtcattcagccaagttaaaagcagctcagatggtacatttaaagacagaaga
gtgttcaaatataatgtggctctgcaacctaatgtcactaggcaatatcgtaagctgaga
cttgtagcaccaaggctcaataagaatgaaccgcaaataacatcagattctaccacgaaa
gacattaaaccagtgagctccaagactattgtatttgttcccccattttggaagaatatc
caccctgagccacaaaggagcagtgggtgtcaggacaaggctaaagcgtcggttgtgttt
gttcctccattcagaaaaggcaaccatgaaaccactgagggtttctctaagtcttcttca
gaagataaaacgtctcccttggtctttgaaagaggtttacatactgaatcatctgtccca
cttcctgagtataaccacatacctgtcaatgacactagttacgataaggctaataagtcc
gttccggaactcaaccaacaacgtattgagaaaaccgaagcaggaagggatggttggagt
agacgaggagtagaggctggtactgcaaaggagtctaaatattgtcagccagcccccaac
tgcacagatgtggcgcaagacacacaatgcctgcaactggccagagacatgcaggacata
aggatcaggaagaagatgcggcagaccattagacctctccctggcagcctgtacctggcc
aaaacatctgggttggcaagggggaccctgaggaatgctgttaggggtcagcaccctgaa
caacacacagtagaacagctgtttggctatggtgtgcatctgcatgttgcggaaatcagc
tctgagaatgctgaggctttccgctttgtttgccgacaccacttcagtagcaaggcattt
atagaggggcgccttcagctgggggacggggcttggctaatcccacgtgacgatggaact
gcaggaaaatatgagttctacagagctttgtgtgacagccctggcgtggaccctaaactg
atcagtgaagactgggtgttcaaccactaccgctgggtggtatggaaaaaggcctgcatg
gaaagggcctttccccaggtgatgggcagcctatgtctgacacctgaacaggtgctccta
caacttaaatacaggtacgatgtggaggtggaccacagcaggcggtcagctctgaggaag
atcatggagagagacgacaacgctgccaagaccatggtgctttgcgtctgtggtattgtc
actaaaggccacaaccctaccaggctgagttggagtgagaccaagacgccacagagtgca
gcggagtcatcccctgtagccgtcatattgctgacggatggctggtatgccatcaagacc
cagctagacttcccactgacagccatgctacaccgtggccgattgagggtgggtgggaag
ctggtggtccatggggccgagctggtaggatctcaggacgcctgctccccactagaggcc
ccggattctctcatgcttaagattagagccaacagtaccagagttgcgcgttgggacatc
aggctagggttctaccgtgacccacgtccattcctcctcccactctcctccctttacagc
agtggaggcccagtaggctgtgtggacattgtggtgttgaggagctaccccacccagtgg
atggagaagaagctggatggagggtttgtgttccgttcgcaacgcgctgaggagacagag
cagcagcgacacgaacaggccgaaaaccgggccagggagatcctgtgtgccaagatccag
gctcagattgagaaggaggaggacgcaggttgggataaaccaagaagccgtaagaggacc
ctgtgtagtcgagacatagagaaactgctggatggagaggagctgtttgaagcagtggag
aatgatccggtttatctggagacttgtctgagtgagcagcagcgggaggcattaaaaaaa
tacaggcagtgtgtttgtgagagaaggcagactgcactgcaggaacgcatccgtcaggct
gtggaggctgagggctgccctgtaagaaaagtctcccctgtctggaagctttgtgtggct
gactccagggcccagccttgcaagaatgtgtacatgttgaatatctggaacccctcccag
gatatacagtccttgctaaaggagggttgccgatacaaggtctaccaactctctacatct
gagggaaaaaaactagcttgtaacaccaccatccaattcactgccactaagaaaactcag
ttccagaacatacaggcttctgctgagtggttatgtgagtgttttcaggccagagaggtg
gttgccttctgcagtctcctgaacccggactttcaaccactgtgtggagagctggacttg
gtgggctacatcatcttgatcacagaaagacaaggttactctccagtggtgtatctagtg
gatgaccagctggactttgtcaaagtacgctgctttagcagtctggcccaacagggcttg
gaggagctggtgaagcctcgggccctggtggccctcactaaccttcagcaccgtacccag
cactcctcccctatctgcagctccattccaagcctgtatgccagcgatctggccatgttc
tccaccaaccccaaggagccacatttaaaggaggcagctgctaaactcaggaaacgtgtg
caggaacaggaaaacttcttcaggattgcagaggagaagttatccaagttaggccatgtt
ccgtctcttgctctgccaccaaggactctaggcttgaaagcggatgccaaaccagataca
aggactattacaccccatcggtttgtacaaaacactggcccctttacccctctgaacagg
gttggccgaaatccacccacctgcttttcagggggagataacaacaaagactcaaaaacc
ttgaaaaggaaaaggggtctggactacctgtgcatccccactcaccctccactctccccc
ctgggtaccatggccttactctcgccacggattagcaaaacctttaacccccctcgcaga
gcagagaccccccggatcctaaagacagctcaggcccccactcctcgatctgtctttaaa
ccttttgaggatgagtgggtggatgatgaagagttggccatgattgacactcaggcccta
cacgatggtgtacagacagacacttga
DBGET
integrated database retrieval system
