Esox lucius (northern pike): 105007541
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Entry
105007541 CDS
T04894
Symbol
polr2b
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
els
Esox lucius (northern pike)
Pathway
els03020
RNA polymerase
els03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
els00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
105007541 (polr2b)
09124 Replication and repair
03420 Nucleotide excision repair
105007541 (polr2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
els03021
]
105007541 (polr2b)
03400 DNA repair and recombination proteins [BR:
els03400
]
105007541 (polr2b)
Enzymes [BR:
els01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
105007541 (polr2b)
Transcription machinery [BR:
els03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
105007541 (polr2b)
DNA repair and recombination proteins [BR:
els03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
105007541 (polr2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
DUF5817
Motif
Other DBs
NCBI-GeneID:
105007541
NCBI-ProteinID:
XP_012989044
LinkDB
All DBs
Position
LG04:complement(4930303..4940831)
Genome browser
AA seq
1174 aa
AA seq
DB search
MYDQDEDIQYDEDEDEITPDLWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQRIVE
DAPPIDLQAEAQHTSGEVEEPPRYLLKFEQIYLSKPTHWERDGAPSPMMPNEARLRNLTY
SAPLYVDITKTIIKEGEDQLQTQHQKTFIGKIPIMLRSTYCLLSGLTDRDLCELNECPLD
PGGYFIINGSEKVLIAQEKMATNTVYVFAKKDSKYAYTGECRSCLENSSRPTSSIWVSMM
ARGGQGVKKSAIGQRIVSTLPYIRQEVPIIIVFRALGFVSDRDILEHIIYDFDDPEMMEM
VKPSLDEAFVIQEQNVALNFIGSRGAKPGVTKERRIKYAKEVLQKEVLPHVGVSDFCETK
KAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEIRIYAQ
KFIDRGKDFNLELAIKTRIISDGLKYSLATGNWGDVKKAHQARAGVSQVLNRLTFASTLS
HLRRVNSPIGRDGKLAKPRQLHNTLWGMVCPAETPEGHAVGLVKNLALMAYISVGSQPSP
ILEFLEEWSMENLEEISPAAIADATKIFVNGCWVGIHKDPEQLMNTLRKLRRQMDIIVSE
VSMIRDIREREIRIYTDAGRICRPLLIVEKQKLLLKRRHIDQLKEREYNNYSWQDLVASG
VVEYIDTLEEETVMLAMTPDDLQEKGVAYCSTYSHCEIHPSMILGVCASIIPFPDHNQSP
RNTYQSAMGKQAMGVYITNFHVRMDTLAHVLYYPQKPLVTTRSMEYLRFRELPAGINSIV
AIASYTGYNQEDSVIMNRSAVDRGFFRSVFYRSYKEQESKKGFDQEEIFEKPTRETCSGM
RHAIYDKLDDDGLIAPGVRVSGEDVIIGKTVTLPENDDELESTNRRYTKRDCSTFLRTSE
TGIVDQVMVTLNQEGYKFCKIRVRSVRIPQIGDKFASRHGQKGTCGIQYRQEDMPFTSEG
ITPDIIINPHAIPSRMTVGHLIECLQGKVSANKGEIGDATPFNDAVNVQKVSNLLSEYGY
HLRGNEVLYNGFTGRKITSQIFLGPTYYQRLKHMVDDKIHSRARGPVQILNRQPMEGRSR
DGGLRFGEMERDCQIAHGAAQFLRERLFEASDPYQVHVCNLCGLMAIANTRTHTYECRGC
RNKTQISLVRMPYACKLLFQELMSMSIAPRMMTS
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atgtatgaccaggatgaagacatccaatacgacgaagacgaggacgaaatcacccccgat
ttatggcaggaagcttgctggattgttatcagttcctactttgatgagaaaggactggtg
cgacagcagctggactcctttgatgagttcatccagatgtccgtgcagaggattgtggag
gatgccccgcccattgacctgcaggctgaagcccagcacacctctggagaggtggaagag
ccgccacgctacctgctgaagtttgagcagatctacctctccaaaccgactcactgggaa
agagatggagccccgtcgcccatgatgcccaacgaggccagactccggaacctaacgtac
tctgcccccctgtatgtggacataaccaagaccatcatcaaggaaggtgaggaccagctg
cagacacagcaccagaagaccttcatcggcaagattcccatcatgctgcgctccacctac
tgcctgctcagcggcctgacggaccgtgatctctgcgagctcaacgagtgccccctggac
cccggcggctacttcatcatcaacgggtcagagaaggtgctcatcgcccaggagaagatg
gccaccaacactgtgtatgttttcgccaagaaggactcaaagtatgcctacaccggggag
tgccgctcgtgcctggagaactcctcacgccccaccagctccatctgggtcagcatgatg
gccaggggaggacagggggtgaagaaaagtgccattggtcagaggattgtgtccactctg
ccctacatcagacaggaagtgcccatcatcatagtgttcagagccctgggctttgtgtcc
gacagagatatcttggagcacatcatctatgactttgatgaccctgagatgatggagatg
gtgaagccttccctggacgaggcttttgtgatccaggagcagaacgtggcgctgaacttt
atcggctctcgtggtgcaaagccgggtgtcaccaaagagaggaggatcaagtacgccaag
gaggtcctgcaaaaagaagtcctaccccatgtcggagtcagtgacttctgcgagaccaag
aaggcctatttcttagggtacatggtccacaggctgctgttggccgcactgggcagaaga
gagctggatgaccgggatcactatggcaacaagagactggacctggccggccccctattg
gccttcctgttccgtggaatgttcaagaacctcctgaaggagatccgaatctacgcccag
aagttcatcgaccgagggaaagacttcaacctggagttggccatcaagacgcggatcatc
tccgatggcctgaagtattccctggccacggggaactggggtgacgtgaagaaggcccac
caggccagagctggagtgtctcaggtgttgaaccgcttgaccttcgcctccaccctctct
cacctacgtcgtgtcaactctccgatcggtagggacggaaagctggccaagcctcggcag
cttcacaacacgctgtggggcatggtgtgcccggctgagaccccagagggtcacgctgta
ggtctggtgaagaacctggcactcatggcctacatctctgtgggctcccagccgtccccc
atcctggagttcctggaggagtggagcatggagaacctggaggagatctctcctgctgct
attgcagatgccacgaagatttttgtgaacggttgctgggtaggaatccacaaggacccg
gagcagctgatgaacactctgaggaaactgaggcgacagatggacatcatcgtgtctgag
gtgtccatgatccgagacatccgagagagggaaatccgcatctacacggacgctgggagg
atctgccgccccctgctgatcgtggagaaacagaagctcctgctgaagaggaggcacatt
gaccagttgaaggagagggagtacaacaactacagctggcaggacctggtggccagcggg
gtggtggagtacatcgacaccctggaggaggagactgtgatgctggccatgacccctgat
gacctccaggagaagggcgtggcttactgctccacctactctcactgtgagattcacccc
tccatgattctgggggtctgtgcctccatcattcccttccccgaccacaaccagtctccc
agaaacacataccagtctgctatgggtaaacaagccatgggcgtgtacatcaccaacttc
cacgtgcgcatggacaccctggcccacgtcctctactacccccagaagcccctggtcacc
acccgctccatggagtacctgcgtttcagagagcttcctgcaggtatcaactctattgtg
gctatcgcttcgtacactggctacaatcaggaagactccgtcattatgaaccgctccgct
gtggaccggggctttttccgatctgtgttctaccgctcttacaaagaacaggagtcgaag
aaaggcttcgatcaggaggaaatctttgaaaagcctacgcgagaaacttgttcaggcatg
agacacgccatttacgacaagttggatgacgacggcctgatagctcccggcgtccgcgtc
tccggcgaggacgtgatcatcggcaagacggtgaccctgccggagaacgacgatgagctg
gaaagcaccaaccggcgctacaccaagcgggactgcagcacgttcctccgcaccagcgag
accggcatcgtggaccaagtcatggtcacgctgaatcaggaaggctacaagttctgcaag
atcagggttcgttctgttcgtatcccccagatcggggacaagtttgccagtcgacacggg
cagaaggggacctgtggaattcagtacaggcaggaggacatgcccttcacttcagaggga
atcaccccagacatcatcatcaacccccacgccatcccctctcgaatgacagttggccat
ctgattgagtgcttgcagggcaaggtttcggccaacaaaggggagattggcgacgctacg
ccgttcaacgacgcggtcaacgtgcagaaagtctctaacctgctgtctgaatacggctat
cacctgagaggcaacgaggtgctgtacaacggtttcacaggtcggaagatcacctcgcag
atcttcctcggacccacgtactaccagcgcctgaagcacatggtggacgacaagatccac
tcccgggcccgaggcccggtccagatactcaacagacagcccatggagggcaggtcacgt
gatggaggtcttcgtttcggggagatggagcgtgactgtcagattgcccacggcgcggcc
cagttcctgcgcgagaggctgtttgaggcgtctgacccctaccaggttcacgtctgcaac
ctgtgcggactgatggccattgcaaacacgcgcacgcacacctacgagtgcaggggctgt
cgcaacaagactcagatctctctggtcagaatgccgtatgcctgcaagctgctcttccag
gagctcatgtccatgagtatcgcccctcgtatgatgaccagctag
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integrated database retrieval system
