KEGG   Esox lucius (northern pike): 105007594
Entry
105007594         CDS       T04894                                 
Symbol
cstf1
Name
(RefSeq) cleavage stimulation factor subunit 1
  KO
K14406  cleavage stimulation factor subunit 1
Organism
els  Esox lucius (northern pike)
Pathway
els03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:els00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    105007594 (cstf1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:els03019]
    105007594 (cstf1)
Messenger RNA biogenesis [BR:els03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage stimulation factor (CSTF) complex
     105007594 (cstf1)
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_THOC3 Beta-prop_WDR3_1st WD40_Prp19 WD40_CDC20-Fz Beta-prop_EML_2 WDR55 WD40_WDHD1_1st Beta-prop_TEP1_2nd Beta-prop_WDR3_2nd WD40_Gbeta CSTF1_dimer Beta-prop_CAF1B_HIR1 Beta-prop_WDR36-Utp21_2nd EIF3I Beta-prop_WDR90_POC16_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_EML WD40_MABP1-WDR62_2nd ANAPC4_WD40 Beta-prop_WDR75_1st Beta-prop_RIG_2nd Beta-prop_TEP1_C NBCH_WD40 Beta-prop_Aladin Beta-prop_EIPR1 WDR90_beta-prop_4th Beta-prop_IFT122_1st Beta-prop_SCAP Beta-prop_DCAF4 WD40_RFWD3 Beta-prop_IFT140_1st Beta-prop_NUP159_NUP214 Beta-prop_VPS8 Beta-prop_NWD2_C Beta-prop_WDR19_1st Beta-prop_DCAF12 DUF7099 Beta-prop_SPT8 VPS8_N Frtz
Other DBs
NCBI-GeneID: 105007594
NCBI-ProteinID: XP_010864887
UniProt: A0AAY5L0F7
LinkDB
Position
LG02:complement(1243775..1250172)
AA seq 431 aa
MYRPKPTLRDRQHLYRLIISQLLYDGYTNIANNLITEVKPQSVVSPSESLMQLAKIGMEN
DDSAVQYAIGRSDTVAPGVGIDLEFDADVQSMSPEASEYETCYVTSHKGPCRVATYSKDG
QLIATGSADASIKVLDTERMLAKSAMPIEVMMNETAQQNMENHPVIRTLYDHVDEVTCLA
FHPTEQILASGSRDYTLKLFDYSKPSAKRAFKHVQEAEMLRSISFHPSGDFLVVGTQHPT
LRLYDVNTFQCFVSCNPLDQHTDSISGVNYNPSANSYVSCSKDGSIKLWDGVSNRCVMTF
DKAHDGAEVCSAVFSKNSKYVLSTGKDSVAKLWEISTGRTLVKYTGAGLSGRQMHRTHGV
FNHTEDYVLLPDERTISLCCWDSRSAERRNLLSLGHNNIVRCLVHSPTNPGFMTCSDDFR
ARFWYRRTTTD
NT seq 1296 nt   +upstreamnt  +downstreamnt
atgtatcgtcccaaaccaaccctgcgggaccgccagcacttgtaccggctgatcatcagc
cagctgttgtatgacggctacaccaacatcgccaacaacctaattacggaggtcaagccg
caaagtgttgtgtctccctcagaaagcctcatgcagctggccaagataggcatggagaac
gatgacagcgcggtgcagtacgccatcgggcggtccgacacggtggccccgggtgttggc
atcgatctggagtttgacgccgacgtccaaagcatgtcccctgaggcgtcagagtacgag
acctgttacgtgacgtcccacaaaggcccctgtcgtgtggccacatacagcaaggacgga
cagctcatcgccaccggctccgccgacgcctccatcaaagtcctggacacggagcgcatg
ctggccaagagcgccatgccaatagaggtgatgatgaatgagaccgcccagcagaatatg
gagaaccaccctgtcatcagaacgctgtacgaccatgtcgatgaggtcacctgccttgca
ttccaccccacggaacagatcctggcgtccgggtcgcgggactacaccctcaaactgttt
gactactccaagccctccgccaagagggccttcaaacacgtacaggaagccgagatgtta
cgctccatctcattccacccgtccggtgacttcctggtggtgggaacgcagcatccaacg
ctccgcctctacgacgtcaacaccttccagtgctttgtctcctgtaacccccttgaccag
cacacagactccatcagtggggtcaattacaacccctcggccaacagctatgtgtcgtgc
agtaaggatggaagtatcaaactctgggacggtgtttctaaccgctgcgtgatgaccttt
gataaggcccatgatggggccgaggtctgctctgctgtcttctccaagaactccaagtat
gtcctctctactgggaaggactcggtcgcaaagctctgggagatctcaaccggacgcacc
ctggtcaaatacacaggtgctggtctgagtggccggcagatgcaccgtacccatggagtc
ttcaaccacaccgaggactatgttcttctgcctgacgagaggaccatctctctgtgctgc
tgggactcccgctctgcggagaggaggaacctgctgtctctgggccacaacaacatcgtc
cgctgcctcgtccactcccccactaacccagggttcatgacctgtagcgatgatttcagg
gcccgcttctggtaccgacgaaccaccactgactga

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