Esox lucius (northern pike): 105007961
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Entry
105007961 CDS
T04894
Name
(RefSeq) laminin subunit beta-1 isoform X1
KO
K05636
laminin, beta 1
Organism
els
Esox lucius (northern pike)
Pathway
els04510
Focal adhesion
els04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
els00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
105007961
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
105007961
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Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
LAMININ_IV_B
Laminin_N
EGF_LMN_ATRN
LAMB1
F5_F8_type_C
Motif
Other DBs
NCBI-GeneID:
105007961
NCBI-ProteinID:
XP_010865412
UniProt:
A0A6Q2X475
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Position
LG23:18353162..18375085
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AA seq
1781 aa
AA seq
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MLVLHIASLLTLGWGALVQQPEFGDVCTEGSCYPNTGDLLIGRAHLLSASSTCGLKKPER
FCIVSHLQDEKKCFVCDSREMYDERMNHTSSHTIENLVTTFAPNRLDTWWQSENGVENVT
IQLNLEAEFHFTHLIMTFKTFRPAAMVIERSMDFGKTWRVYRYYSYNCETSFPGISVGPL
VQVDDVICDFRYSDIEPSSEGEVIFRVLDPAFEIEDPYSSRIQNMLKITNLRVQFTKLHT
LGDNLLDSRDEVAEKYYYALYDMVVRGNCFCYGHASKCSPVDGRHVGTEGMVHGHCMCNH
NTEGLNCERCQEFYNDLPWRPAEGRNTHACKRCECNRHSGSCHFDMAVYLSTGNVSGGVC
DQCQHNTMGRQCEQCRPFYYQHPERHLRDPDICQPCSCDPAGSLQGGVCDGRTDVSAGLI
SGQCRCKASVEGERCDQCRQGHYGLGQGPHGCLECTCNTLGTLPGGNPCDTHDGHCFCKR
LVTGRNCDQCLPQHWGLSNDMDGCRPCDCDQGGAINNDCSPISGQCLCREHMHGRRCDQL
ESGFYFIALDHYTYEAEDAKHGPGVTVVPRPYPQGSSPTWTGAGFANVPEGAFLEFHINN
IPESMDYDMLIRYEPQLPDRWERVEVNVIRPYTRRPGQPVSQCENTLPGGDHQLVSLPPE
SRHVVFPRPVCLDKGLNYTVRLSLPLYSSLSDVHSPYTLIDSLVLMPRVRELELFEGSHG
EGAWDTFQRYRCLESSQSVIKSPVADICNEYIFSVSALLHQGAMACQCDLQGSLSTVCNP
RGGQCQCRANVVGRNCDRCAPATFLFSPSGCRPCECSPTGSVSPFCHERTGQCECMPGAS
GRQCLHCLPGYWGFPQCRPCQCNGHSDFCHPQTGECQGCRDNTQGHMCERCLDNYHGDPV
LGSGGQCRPCMCPDGPGSGRQFSDGCYQTANNYQLVCVCSPGYRGARCNECAPGYYGNPH
VTGGSCMPCRCNGNINLQDPGSCDPRTGACLLCLHHTEGHGCQRCMLGYYGVAAAQNCQK
CMCYAPGTTPEACPSPGSCHCDLQTGHCPCQPNVIGQKCDRCAPDTFNIASGRGCAKCAC
DPVHSFGTSCNELTGQCSCRSGFGGRKCNECREMFWGDPEVKCQACDCDLRGIASEQCHR
STGQCVCVEGVSGPRCDQCARGYQGEFPACERCHQCFNEWDRVLSELTNQTQRMMGHVTE
FQSVGVTAPYKDTVSTLEDSANALRAIIENNLAIQMMEDVQQMMQQASERMAKLNERLTV
SESSLSRLTVNANDTEAGLNTLREEAQDLEKTVRDMTVHIQTVKNSNTEGALDTIAEAHL
KSKRAEIRANQSTSYPDNTLEQSATQRRAAEDKLSQNQLEFDLKQQKHEKKLQRLASELA
SVDVSELSEKTCGTVGGEKGCAVSPCGGLGCVSEDGARHCGGEGCDGVATKAQSALRTAK
ELDREIYSAMQEVDKLSSMVWEAKVQADEAKLGAQEVLLKSNRSWERVERSNDQLRSLIK
EIRELLTNDRTNVDLIEAVSNEVLTLKMPTSSEQLEDLTQEIRERVAGLSSVEDILSQSA
SQVHTAKTLLEQAQSARQEASDLKETAALVKGVLEDTESVQNNASVAIEQAQNNTRRALD
KIFSVETETAKSELNLSIAEGRLLQLEGDVTLLREKSLDTTQHTLLSETVSENARKDAEQ
AQTEFDEEVKDLYGVVEGLVVTKAGAVSTAREKAEQLQQEAKELLSQTGDKLKRLRELER
SYEAYQRTLEAKAEHLAGLEQTVRQLLDDISKKVTIYSTCL
NT seq
5346 nt
NT seq
+upstream
nt +downstream
nt
atgttggtattacacatcgcatcacttctaaccctcgggtggggagccctagtgcagcag
ccggagtttggggatgtgtgcacagagggcagctgctatcccaacaccggggatcttcta
atcggccgcgcgcacctgctcagcgcctcctccacctgcggtcttaagaaaccggagcgc
ttttgcatagtcagtcacctgcaggacgagaagaagtgctttgtgtgtgactccagggag
atgtatgatgagaggatgaaccacacctccagccacaccattgagaacttggtcaccacc
tttgcacccaatcgcctcgacacctggtggcagtcggagaatggtgtggagaatgtgacc
attcaactgaacctggaggccgagttccacttcacacatctcatcatgaccttcaagacg
tttcgtcccgccgcaatggtaattgagcgctccatggattttgggaagacgtggcgggtg
taccgttactatagctacaactgtgagacctccttccctgggatctctgtggggccccta
gtccaggtggatgacgtcatctgtgacttccgctactcagacatcgagccgtcatcagag
ggtgaggtgatatttagagtgttggacccagcctttgagattgaagacccatacagtagc
cggatacagaacatgctgaagatcactaacctgcgtgtccagttcactaagcttcacacg
ctgggtgacaacttgctggactcccgggacgaagtcgcagagaagtactactacgcctta
tatgacatggttgtccgtggcaactgcttttgctatggacacgcctccaagtgcagcccg
gttgatgggagacatgtaggcactgagggcatggtccacggtcactgcatgtgcaaccac
aacacggagggtctgaactgtgagcgctgccaggagttctacaacgacctgccttggagg
cctgccgagggacgcaacacccacgcctgcaagaggtgcgagtgtaaccgtcactccgga
tcgtgtcactttgacatggctgtgtatctgtccactgggaacgtgagcggaggagtgtgt
gaccagtgtcaacacaacactatgggccgtcagtgtgagcagtgcaggccgttctactac
cagcaccccgaaagacacctgagggaccccgacatctgtcaaccgtgtagctgtgacccg
gctggctctctgcaaggcggcgtgtgtgacggcaggacggacgtgtccgccggtctgata
tcgggacagtgtcgctgcaaagccagcgtggagggggagcgctgtgaccagtgtcgtcag
ggacactacggcttgggacaggggcctcacggctgtctggagtgtacctgtaacaccctg
ggcacgctgccaggaggaaacccgtgtgacacacacgatggacactgcttctgcaaacgc
ctcgtcaccggccggaactgcgaccagtgcctgccacaacactgggggctgagcaacgac
atggacggctgcagaccgtgtgactgcgaccagggcggggccatcaacaatgactgttcc
cccatatcaggccagtgtctgtgtagggaacacatgcatgggagacgctgtgaccagttg
gagtcgggattttacttcatcgccctggaccactatacttatgaggctgaggatgccaag
cacggccctggggtgacggtggttcccaggccttatcctcagggcagtagtcctacctgg
acgggggctgggtttgccaatgtaccagaaggcgccttcctggagtttcacatcaacaac
atacctgaatccatggactatgacatgcttatccgctacgaaccacagctgccagatcgg
tgggagcgagtggaggtgaacgtgatacggccttacaccaggagaccgggccagccggtc
agtcagtgtgaaaacacactgccaggcggagaccaccagctcgtgtctctccctccagag
tccagacatgtggtgttcccgaggcctgtgtgtctagacaagggtttgaactacaccgtg
cgtctcagtctgcccctctactcctccctcagtgatgttcatagcccctacaccctcata
gactcattggtgctgatgccacgggtgcgtgagctggagttattcgagggctcccatggc
gagggggcgtgggacacttttcaacggtaccgctgcctggagagcagccagagcgtcatc
aagagccctgtggcggatatctgtaacgaatacatcttcagtgtgtctgccctgctgcac
cagggggccatggcctgtcagtgtgacctccagggctccctcagtaccgtgtgcaaccct
agaggtgggcagtgccaatgccgggcgaacgtagtgggcaggaactgtgaccgctgtgcc
cctgccaccttcctgttcagcccgtccggatgcagaccctgtgaatgcagtcccacaggc
tcagtcagcccattctgccacgagcggaccggtcagtgtgagtgcatgccgggggcgtcg
gggcgccagtgtctccactgcctgccgggttactggggtttccctcagtgccggccctgc
cagtgcaacggccacagtgacttctgccaccctcagaccggggagtgccagggctgccgc
gacaacacccaagggcacatgtgtgaaaggtgtttggacaattaccatggcgatccggtg
ttgggttcgggtggtcagtgccggccctgcatgtgtcccgacgggccggggagcggacga
cagttctcagacggctgctaccagactgccaacaactaccagctggtctgtgtctgtagc
cccggatatagaggggcccggtgtaatgagtgtgcccccggctactacggtaatccccat
gtaaccggcggtagctgcatgccctgccggtgcaacggcaacattaacctgcaggacccg
ggctcctgcgacccgcgcacgggcgcctgcctcctgtgcctccaccacaccgagggccac
ggctgccagcgctgcatgctgggatactacggcgtggccgccgcgcagaactgccagaag
tgcatgtgctacgctccgggcactacgccggaggcgtgtccttccccagggtcgtgtcac
tgcgacctgcagaccggccattgtccgtgccagcctaatgtgattggccagaagtgcgac
cgctgcgcccccgacacgttcaacatcgccagcggccggggatgcgctaagtgtgcctgt
gaccccgtccactcgttcgggacgtcctgcaatgagctgacggggcagtgctcgtgccgg
tcaggtttcgggggacgaaaatgcaacgagtgccgcgagatgttctggggagatcctgag
gtcaaatgtcaagcatgtgactgtgacctgcgtggtatcgccagcgagcagtgccaccgt
tcgacaggtcagtgcgtgtgtgtggaaggagtgtcgggtcccaggtgtgaccagtgtgcc
aggggctaccagggcgagttccccgcatgcgaacgatgccatcagtgcttcaacgagtgg
gaccgcgtgttgtcggaactgaccaatcagacgcagcgtatgatgggtcatgtgacggag
ttccagagcgttggggtgacggcaccgtacaaagacacagttagcactctggaggacagc
gctaatgctctccgggccataatagagaacaacctcgctatacagatgatggaagatgta
cagcaaatgatgcagcaggcttctgagcggatggccaaactgaacgagaggctgaccgtc
tcagagtcttcactgtcccgcctgactgtcaacgccaacgacactgaggcaggtctaaac
acactgagagaggaggcccaggacctggagaaaaccgtccgagacatgacagttcatatc
cagactgtgaagaattctaacaccgagggagcgttggataccattgctgaggcccacctg
aagtctaagagggcagagatccgtgccaatcagtccaccagctaccctgacaacacactg
gagcagtcggctacacaacggcgtgcagcggaggacaaactgagccagaaccagttggag
tttgacctgaaacaacagaagcacgagaaaaagctgcagaggctcgcctcagaactcgcc
tcggtcgacgtgtcagaactcagcgagaagacgtgtgggactgtcggtggggagaagggg
tgtgctgtttccccctgcgggggtttggggtgtgtgtcggaggacggcgcccgtcactgc
ggtggtgaggggtgtgatggggtggcgacgaaggcacagagtgctctgagaacagccaag
gagttggaccgggaaatctactctgccatgcaagaagtggacaagctctctagtatggtg
tgggaggcaaaggtgcaagcggacgaagccaagctgggtgctcaggaggtcctgctgaaa
tccaaccgaagctgggagagagtggagcggagcaacgatcagctccgcagccttatcaaa
gagatacgagaactactcaccaatgaccgtaccaacgtggacttaatcgaggcggtgtcc
aacgaggtgctgaccctgaagatgcccacgtccagcgagcagctggaggatctgacccag
gagatcagagagcgggtggccggcctctctagtgtggaggacatcctcagtcagagtgcc
agccaagttcacacggccaagacactgctggagcaggcccaaagcgcccgtcaggaggct
tctgatttgaaggagacagccgccctggtcaagggggttctggaggacacggagagtgtg
cagaacaacgcgagtgtggccatcgaacaggcccaaaacaacaccaggagagctcttgac
aaaattttctctgtggagacagagacggctaagtccgagcttaatctgagtattgccgaa
gggcgtctgttgcagctggaaggagacgtgactctactgagagaaaagagtctggacacc
acccaacacacactgctcagtgagacggtgtctgagaacgccaggaaggacgcggagcag
gcccagacggagtttgacgaggaggtgaaggatttgtacggtgtcgtggaaggtttggtg
gtgacgaaggccggagccgtttccaccgccagggagaaggcggagcaactgcagcaagag
gccaaggagctgctgtcccagactggcgacaaactgaaaagactcagagagttggagagg
tcatatgaggcctaccagcgaactctggaagccaaggcagagcatctggctgggctggaa
caaactgtacgccagttgctcgatgacatcagtaagaaagtcaccatctacagcacctgt
ctttag
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