Esox lucius (northern pike): 105008044
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Entry
105008044 CDS
T04894
Symbol
tarbp1
Name
(RefSeq) probable methyltransferase TARBP1
KO
K15333
tRNA guanosine-2'-O-methyltransferase [EC:
2.1.1.34
]
Organism
els
Esox lucius (northern pike)
Brite
KEGG Orthology (KO) [BR:
els00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
els03016
]
105008044 (tarbp1)
03036 Chromosome and associated proteins [BR:
els03036
]
105008044 (tarbp1)
Enzymes [BR:
els01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.34 tRNA (guanosine18-2'-O)-methyltransferase
105008044 (tarbp1)
Transfer RNA biogenesis [BR:
els03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
105008044 (tarbp1)
Chromosome and associated proteins [BR:
els03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
105008044 (tarbp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SpoU_methylase
TARBP1
TPPII_GBD
Motif
Other DBs
NCBI-GeneID:
105008044
NCBI-ProteinID:
XP_028975859
LinkDB
All DBs
Position
LG05:6925990..6960983
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AA seq
1375 aa
AA seq
DB search
MVLQDGLTHKDNVSRKRALYLLKRCVALSEEEAAEYPSHSTSGEGGKEEIMFRWVPDQAK
LLREFWEDYALVMETLEENQIHVVRPVLNRIDTLIQTAANDSQGVSLLHPSWLLCVYHRM
FHSENKSVMREGVHHLLELQALRRPSFARAFSQFIVGPFMDVMSESSLFHRTAGQSVGEC
PELAVKLQGFMVAFFDSLPQESRGPVLLQLVRRLGSEHWCAVPILFLSQALSRLPPRPLL
GPDGLHALREVLRCTMITHQVLLRGAAQCFLLHSALSLTDVTSVTLDDVFGFLVHFRADE
SLGRGTSLWNQLCDWLSDNEGSFRPRLGEAGDGTSTVPEGETVRGYVQRQMEAFLRVPAG
ADVVDPQLVLWRPPAQPDRLPEPGEAELLARATLLCVDMEVRRSGQKTADASAGLESLLR
PLLDTLSRLGTNVYLPLRKTDKSLQLLLRLVQLRHGRHTKAPELQPEREQVDSVTVSMET
LVLGAVESIQEFVLRRLSGELQEMCDVQRADLYLSVLRELVAKWHVSKIQDTFFSRLVRY
ALRTLQADQIPTVAGQVIRAVAMATLAMTCEVAELGVFSHQSETLNLLVDLSGYFYCPDA
SPLSLPHFNQTLLKPPAEEHSTGGLEPGPLLQDWGRLAARFIRDQWACLGYGRRLGSPGP
LQLSRTPEALQAAIEAVSLLPSDLVLPVLDFMASVMPQVVLSDEARCIEAVTVSWRLVLG
LSSNPRDFWPALQGFVTMAFQHSLLGLTEEQAPGLTSTLQKIAGELMDLSQAKTGVFSVL
IQHCCNTWLPSCPGSEPGSGGLSQSDAVFSSALLHADILAEACVYGPVFRRDQRLIQEVQ
VYVERLGEECAANTAVTSDNRDDQFPRVCVLAFLSCLQPSDKLHERLMEDLVLRLLTKDE
AISKSKQRYYSNSLQHRVKNRVWQTLLMLLPKLREEFVGMVLVRVFQAGFVSNQASVKYL
IEWMMVLILFQFPEHMDCLWACFNVDQEKTKTSICTFLSVLVHLNIILPHLKEKALHWRK
ALDVTLQWCFSHNFSVRLYALLALKRVWGLEGPRAEAEEEAGGPDSLGGLATVVKACLHQ
AEAMQSTGNANKNWTRIQEHFFFGAFHPIRDYSVETIFYTLPSLSEVSEDEWILPGKFES
LVDFSQSASLPLRNPVPDLSLLHPGDWIQQDKGEQDHEERWAEVQKKMTPWRLGIQEPEL
GMVPQQRAARLGKLNSALLVVATLIDKPTNLGGLCRTCEIFGASGLVLDSLRHVTDKHFQ
ALSVSSELWLPLLEVKPMELADFLQGKKREGYCIVGVEQTAKSQSLQDYRFPKKTLLLLG
NEREGIPANLLQLLDVCVEIPQQGVIRSLNVHVSAALLVWEYTRQYLPPAGGKSD
NT seq
4128 nt
NT seq
+upstream
nt +downstream
nt
atggtcctacaagatggactgacacacaaagacaacgtgtccaggaaacgggctttgtac
ctgttgaaaaggtgtgtcgctctgtcagaggaggaggcggctgaatatccaagccattca
acgtcgggtgaaggaggcaaggaagagattatgttcagatgggtcccagaccaagccaag
ctgctcagagagttttgggaggactacgccttggtcatggagacgttagaggagaaccag
attcacgtggtccgaccggtgctcaacagaattgatacgttgatccaaacggcagcgaac
gatagtcaaggcgttagtctgttgcacccgtcatggctgctgtgtgtgtaccatcgaatg
ttccacagcgagaacaagtctgtgatgagggagggagtgcatcacctgctggagctccag
gcactgcggcgtccatccttcgcccgggccttctcacagttcatagtgggcccattcatg
gatgtgatgtctgaaagctccctctttcacagaactgcaggccagagtgttggagagtgt
cctgagctggcagtcaagctgcagggcttcatggtcgctttcttcgacagccttcctcag
gagagcagaggtcccgtgttgctgcagctggtccggaggttagggtctgaacactggtgt
gccgtccctatcctcttcctgtctcaggccctgtcccgcctccctccccgcccactcctg
ggccctgacggtctgcatgcactcagggaggtacttcgctgtaccatgatcacccaccag
gtgctgctcagaggggctgcccagtgtttcctgctccacagcgccctctccctgacagat
gtgacatctgtgacactggacgatgtgtttggttttctggtccacttcagagcggacgag
tctcttggtagggggacatccctttggaatcagctgtgtgactggctgtctgacaacgaa
ggcagcttccggcctagactcggagaagctggtgacggtaccagcaccgtcccagaagga
gagactgtgagaggctacgtccaacgccagatggaagccttcctccgagtcccagctggc
gcagatgttgttgatcctcagcttgtgttgtggcgtcctccagcccagccggacaggtta
cctgaacccggggaggctgagctgctagccagggccaccctgctgtgtgtggacatggag
gtgaggaggtcaggacagaagactgctgatgccagtgccggtttggagtctctcctgcgc
cccctactggacacactgagcaggctcggtacaaatgtttacctgccactgcgcaagact
gacaagagcctgcagctgctgctgagactggtgcagctgagacacggcagacacaccaag
gctccagaactgcagccagagagagagcaggttgacagtgtgacggtctccatggaaacg
ctggttctgggtgcggtggagtccattcaggagttcgtccttcgaagattgagcggagaa
ctgcaggagatgtgtgatgtccagcgggctgacctgtacctgtcggtgctcagagagctg
gtggcgaagtggcatgtctccaagatacaggacacctttttctctcgacttgtcagatac
gccctgaggaccctacaagcagaccagatccccacagtggctggtcaggtgattagggca
gttgccatggcaacattggcaatgacctgtgaagtggcagagctcggagtattcagccac
caatcagagaccttgaatctactggtagatctgtctggatatttctactgtcctgatgcc
tccccactctccctcccccacttcaaccagaccctgctgaaacccccagctgaggaacac
tcaaccggtggcttggagccgggtcctctactccaggactggggacgtctggctgctcgt
ttcatcagggaccagtgggcatgtctgggctacgggagaagacttggatccccggggccc
ctgcagctctccaggaccccagaggccctccaggcagctatagaggccgtctctctgctc
cccagtgacctggtgcttcctgtgctggacttcatggcttctgtaatgccgcaggtggtg
ctctctgatgaggctcggtgcatagaggctgtgactgtctcctggaggctggttctgggg
ctgagcagtaacccccgggacttctggccagccctgcagggcttcgtgaccatggccttc
cagcacagcctgctggggctcacggaggagcaggccccgggtctcacctccacgctgcag
aagattgccggtgagctgatggacctgtcccaggccaagacgggtgtgttcagtgttctg
atccagcactgttgcaacacctggctgccctcctgcccaggaagtgaaccaggaagtgga
ggcctaagccagtcagatgccgtgttttccagtgccctcctgcatgctgacatcctggct
gaggcgtgtgtgtacggacctgtgttcaggagagaccaaaggcttatccaggaggtccag
gtttatgtggagaggcttggagaggagtgtgctgccaacactgccgtgaccagtgataac
agggatgaccagttccctcgtgtctgtgtcttggcgtttctgagttgcctccagccctcc
gataagctccatgaaaggctgatggaagacctggttcttcgcttgctgacaaaagatgag
gccatatcaaagtcaaaacagcgttactacagcaactccctgcagcatcgtgtgaagaac
agagtgtggcagacactactaatgctgctgcccaaactgagagaggagtttgtggggatg
gttctggttcgtgtgtttcaggcaggcttcgtcagtaaccaggcatctgtcaagtatctc
atagagtggatgatggttctgattctgttccagttccctgaacacatggactgtctctgg
gcctgcttcaatgtggatcaagagaagaccaagaccagcatctgtacgttcctctctgtc
ctggtccatctaaacatcatcctgcctcatctgaaggagaaggctctgcattggcgcaag
gccctggatgttacactccagtggtgtttcagccacaacttcagcgtgcgtctgtacgcc
ctgctggcactaaagagggtttggggcctggaggggcccagggccgaagcggaggaggag
gccgggggcccagacagtttggggggcctggcaactgtcgtcaaggcctgtctgcaccag
gcggaagctatgcagagtactggaaatgccaataagaactggaccaggattcaggagcac
ttcttctttggtgccttccaccctatcagagactatagtgtggaaaccatattctacaca
ttacccagcctgtcagaggtgtctgaggacgagtggattttgcctgggaagtttgagagc
cttgtggacttttcccagagtgcatctcttccgttgaggaaccctgtccctgacctgagc
ctgttgcatcctggggactggatccagcaggataaaggtgagcaggatcatgaggagcgc
tgggcggaggtgcagaagaagatgaccccctggaggttagggatccaggagccagagctg
ggcatggtcccccaacagagagcagcgcgcctgggcaagctgaacagcgccctcctggtg
gtcgccacgctcattgacaagcccaccaacctgggaggcctttgtcggacgtgtgagatc
tttggtgccagtggtctagtgctggacagtcttcgccatgtcactgataaacacttccag
gccctgagtgtctcttctgagctctggctccccctactggaggtaaagcccatggaacta
gctgacttcctgcaggggaagaagagggagggctattgcattgtgggagtggagcaaaca
gcaaagagtcagagcctccaggactacaggttccctaagaagactctgttactgctgggt
aatgagcgcgagggtatcccagccaacctgctgcagctgttggacgtgtgtgtggagatc
cctcagcagggcgtcattcgttccctcaatgtgcacgtgagcgccgccctgctggtatgg
gagtacacccgccagtacctgccgcccgccggggggaagtcagactga
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