Esox lucius (northern pike): 105008404
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Entry
105008404 CDS
T04894
Symbol
tdp2
Name
(RefSeq) tyrosyl-DNA phosphodiesterase 2
KO
K19619
tyrosyl-DNA phosphodiesterase 2 [EC:3.1.4.-]
Organism
els
Esox lucius (northern pike)
Brite
KEGG Orthology (KO) [BR:
els00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
els03400
]
105008404 (tdp2)
DNA repair and recombination proteins [BR:
els03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
105008404 (tdp2)
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Gene cluster
GFIT
Motif
Pfam:
UBA_4
Exo_endo_phos
UBA_8
Exo_endo_phos2
TAP_C
Motif
Other DBs
NCBI-GeneID:
105008404
NCBI-ProteinID:
XP_010866004
UniProt:
A0AAY5K9S2
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Position
LG10:2075090..2078019
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AA seq
380 aa
AA seq
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MANIPTSVTTLEETRTRLCEEFASLTGSDSAVAQCYLAENDWEMERALNSFFEADMEAVF
EVEDSPEQNSSPPKVKRQKLDKPQTNEECIDLTNEEAACASSARVTDSKSVEPRASSSGT
SSEDPDDSKLSLVSWNVDGLDTANLGDRARGLCSYLALYTPDVVLLQELIEPYVQYLKKR
AVSYTIIEGGEEGYFTGLMLKKSRVKLLKSEIVSFPSTQMMRNLLVAQVKFKEQDLCVMT
SHFESCKGQAEERMKQLRLVLKRMNEAPPNVTVIFGGDTNLRDTEVVKVGGLPHGVCDVW
ERLGKQEHCRYTWDTRANSNKSVPYVSRCRFDRIYLRPAKEGPGSQMAPDHMALLGLEKL
DCGRYTSDHWGIYCSFIPGS
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atggctaatattcctacgtccgtgacgacattagaagaaacgagaactcgtctctgtgag
gagtttgcgtccctcacaggatcggatagcgctgtggctcaatgctaccttgctgaaaat
gactgggaaatggagagagctctgaattcattttttgaggcagatatggaagcggttttt
gaagtggaggattcacccgagcagaacagtagcccacccaaagttaaaagacagaagttg
gacaaaccacagaccaatgaggaatgcattgacctgaccaatgaggaggctgcatgtgcc
agcagtgcacgggtaactgactccaagtcagttgaacccagagcctcctcttcaggcacc
agctcagaggacccggatgacagcaaactgtcgctggtttcgtggaatgtggacggtctg
gacacagcaaacctgggtgaccgcgctagaggcctctgctcttaccttgccctttacacc
cctgatgtggttttgctgcaggaactcattgagccatatgttcaatacctgaagaagagg
gctgtaagctacaccattattgagggaggtgaggagggctactttactggtttgatgctg
aagaagtccagagtaaaactcctgaagagtgagatcgtcagtttcccatcaacgcagatg
atgaggaatctgctagttgctcaggtgaagtttaaggagcaggacctgtgtgtgatgaca
tctcactttgagagctgtaagggccaggcagaggagaggatgaaacagctcaggctggtg
ttgaagaggatgaacgaggcaccccccaatgtgactgtcatttttggaggggacactaac
ctgagagacacagaggtggtgaaggtgggcggtcttcctcatggtgtgtgtgacgtgtgg
gagcgcctgggcaagcaggaacactgcagatacacatgggacacgagagccaacagcaac
aagagcgtcccgtatgtcagccgctgtcgctttgaccgcatctacctgcggccggccaag
gagggcccgggttcccagatggccccggaccacatggccctgctgggtctggagaagcta
gactgcggtcgctacaccagtgatcactgggggatctactgtagcttcatccctggctcc
tga
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