Esox lucius (northern pike): 105009323
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Entry
105009323 CDS
T04894
Name
(RefSeq) putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32 isoform X1
KO
K18994
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32 [EC:
5.6.2.6
]
Organism
els
Esox lucius (northern pike)
Brite
KEGG Orthology (KO) [BR:
els00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
els03041
]
105009323
Enzymes [BR:
els01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
105009323
Spliceosome [BR:
els03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
105009323
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
HA2_N
Cue1_U7BR
Motif
Other DBs
NCBI-GeneID:
105009323
NCBI-ProteinID:
XP_010867046
UniProt:
A0A3P8YEH8
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Position
LG06:6317483..6331714
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AA seq
742 aa
AA seq
DB search
MADGNHLMENEICSDSETADCQEEAFGFGDDLELNQFDGLPFSSRYYKLLQERKSLLVWK
ARGEFADALANNQLVIVSGTTKTGKSTQIPQWCAEFCLSARYRHGVAVCTQIHQRRAVEL
ALMAADEMDVNIGHEVGYTLPLETCCSADTLLRYCTDDMLLREMMSDPMLEHYGAIVIDQ
AHERTVSTDVLLGLLKNILVRRPHLRVVVLTVSSMTERLLAHFGSNVPVVSLEAARPAEV
VFSPSKDYLYSALRLVLKIHQTREDGDVAVFLASAQEVVCAQAVLQREGTRLGADLGDLL
PLRLYPGQVWGPPPLVEEFRGTGTARCRRVFLSTRQGEDLFWAVDSVRFVIDAGVEKRCV
YIPRIRANSEVLGPISRSQAEIRRQLIGSTGKCFCLYPAETQLPTEISPQILESNLTSTV
LFLKRMEIAGLGHCDFLTRPDPEGLMQALEELDYLAALDDDGNLSEIGIILSELPLEAQM
AKALLASCEFDCVTEVVTIAAMLSAPSCFLEPPVGRAQEALQCHRKFQHPEGDHFTLINI
YNAFKQRGPYSSVEKWCQDYYLNLRALQTADTIRSELTDILKRIELPVSEGSFGTKSNTL
NIKRALLAGFFMQIARDVDGSGNYFMLTHKHIAQVQPSSSYGARTHQLGLPEWLLFHEYT
LSENNCIRTVSKISPELFIQMAPQYFFYNLPPSESKDILQHILDGVLSGHAKDRQQQNPT
IASEEVKDCSAVAQSNDRCVLQ
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atggcggacggtaatcatttgatggagaatgaaatttgttcggattcggagactgctgac
tgtcaggaagaagcgttcggctttggagacgatctggaactgaaccaattcgatggatta
cccttttcctctcgttattataaactactgcaggagaggaagagtctgctggtttggaaa
gctagaggggagttcgcggatgccttggcaaacaatcaacttgttattgtctcgggcaca
actaaaacggggaaaagtactcagatcccccagtggtgtgccgagttctgcctgtcagcc
aggtaccgtcacggcgtggcggtgtgcactcagatccaccagcggcgtgctgtagagctg
gccctcatggcagccgatgagatggatgtgaacatcggacatgaagtgggctacactctg
cccctggagacgtgctgttctgccgacacgttgctcaggtactgcaccgacgacatgttg
ctccgggagatgatgtccgacccgatgttggagcactacggggccatcgtgatcgaccag
gcccacgagagaactgttagcaccgacgtcctgctgggactgctcaagaacatcctggtg
cgtcggccgcacctccgtgtggtggtcctgactgtgtcgtccatgacagagcgactgctg
gcacacttcggtagtaacgtccctgtggtcagtctggaggccgcccgtccagccgaggtg
gtcttcagccccagtaaggactatttgtactctgccctcaggctggtgctgaagatccac
cagaccagggaggacggagatgtggccgtgttcttggcttcagctcaagaggtggtctgt
gcccaggctgtgctccagagggagggaaccaggctaggagcagacctcggggacctgctc
cctttgaggctgtaccctggccaggtttggggcccccctcccctggtggaggagtttagg
ggtacaggcacagccaggtgtcggcgggtcttcctctccacccgtcagggcgaggacctg
ttctgggctgtggactcggtccgctttgtcatcgacgcgggtgtggagaaacgatgtgtg
tacatccccaggataagagccaactctgaagtccttggacccatcagtagatcccaggca
gaaatcagaaggcagctcattggatcaacaggaaagtgtttctgcctgtaccccgcggag
acccagctccccacagagatctctcctcagatcctggagtccaacctcacgtccactgtg
ctgtttctcaagaggatggagatagcagggctgggacactgtgacttcctcactagacca
gatcctgagggtctcatgcaggcattggaggagctggattaccttgcggcattagacgac
gacgggaacctatcagagattgggatcatcctctctgagctcccattggaagctcagatg
gccaaggctctgctggcgtcctgtgagtttgactgtgtcaccgaggtggtgaccatcgcc
gctatgctgtcagcaccgagttgcttcctggagccacctgttggcagggcccaagaagct
ttgcagtgtcacagaaagttccagcaccccgaaggggaccactttacactcatcaacatc
tacaatgctttcaaacagagaggaccatactccagcgtggagaagtggtgtcaggactac
tacctgaacctcagagccctccagacggccgacaccatcaggtctgagctgacggacatc
ctgaagaggatcgagctgcccgtctctgagggctccttcgggaccaagagcaacacgctg
aacatcaaacgggctctgctggccgggttcttcatgcagattgcccgtgatgttgatgga
tcaggaaactacttcatgttgacacacaagcacatagcccaggtccaaccgtcctccagc
tatggggccaggacacaccagctgggcctgcctgaatggctgctgttccatgaatacact
ctctccgaaaacaactgcatccgaacggtctccaaaatctcccccgaattgttcattcag
atggctccacagtatttcttctacaacctgcctcctagtgagagtaaagacatactacag
cacatcctggatggggttttatctggacatgccaaagacaggcaacaacagaatccgaca
attgccagtgaagaggtcaaagactgcagcgcagtggcacagtccaatgacagatgtgtg
ctacagtga
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