Esox lucius (northern pike): 105009664
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Entry
105009664 CDS
T04894
Symbol
dhx36
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
els
Esox lucius (northern pike)
Pathway
els03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
els00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
105009664 (dhx36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
els03019
]
105009664 (dhx36)
03012 Translation factors [BR:
els03012
]
105009664 (dhx36)
Enzymes [BR:
els01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
105009664 (dhx36)
Messenger RNA biogenesis [BR:
els03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
105009664 (dhx36)
Translation factors [BR:
els03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
105009664 (dhx36)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
DEAD
HA2_N
AAA_22
nSTAND3
AAA_19
ATPase
NB-ARC
DUF7428
AAA_16
NPHP3_N
PhoH
Tn7_Tnp_TnsA_C
DUF4211
Motif
Other DBs
NCBI-GeneID:
105009664
NCBI-ProteinID:
XP_012996175
LinkDB
All DBs
Position
LG01:36838642..36904142
Genome browser
AA seq
1050 aa
AA seq
DB search
MSFEGYGGRRGGRRGGRGFGRDGSRERWDRGAGSSGSRPPRNSEWESREERGGRGGGPNR
PPSHLKGREIGLWYAKWGGLKRKENERKSRAVVQMDESREQHITNLLNTVQRGPSREARP
STSDNWRSASSVPDRGGHCYFDGDEPSPDVLKTETKQEEVETPVQNSLLTSQRYFPKEAP
KVEPQEERTETEQIGKDKDLEYLFQEVVRENALDQQLKRDLERKRADSKYLEMLKFREKL
PSFGKKEELVEVIRSNQVLVVSGETGCGKTTQVTQFILDDYIDRGMGSLCRVVCTQPRRI
SAISVAERVAAERAERVGDGNSCGYQIRLQSRLPRKQGSVLYCTTGIILQWLRSSPLLST
ISHLVLDEIHERNLHSDVLLIIVKDLLRVRHDLKVILMSATLNAEKFSRYFDNCPMIHIP
GMTFPVQEFLLEDVVEMLRYRPQKQERRPRWKRGFMQAQNSRPEKEQKEAEYKESWPCYA
RTLRDRYSDSTIEVLEMMDDDDKIDLELVVQLIRHIVLSEEEGAILVFLPGWDNISSLND
LLMTQQMFKSDRFVIIPLHSLMPTVTQTSVFKRPPPGVRKIVIATNIAETSITIDDVVFV
IDGGKIKETHFDTQNNISTMAAEWVSLANAKQRRGRAGRVCPGKCYHLYNSLRASLMEAY
QLPEIMRTPLEELCLQIKILKLGPIAEFLRKALDPPTEEAITLAITHLMDLNALERSEAL
TPLGFHLARLPVEPHIGKLILFGALLGCLDPVLTIAASLSFKDPFFIPLGKEKVADMRRR
TLSRDSKSDHLTIVNAFCGWEEAKLRSNQVEREFCWSNFLSANTLQMLHNMKGQFAEHLL
GAGFISSKNPKDPEANFNSENEKLIKAVIVAGLYPKVAMIKPSGSKKRPVRVYTKTDGKV
CIHPKSVNAEEIQFNYSWLIYHLKMRTSSIFLYDCTEVSPFSLLFFGGDITIQTDEETIA
VDEWIVFQSPARIANLVKSLKKELDSLLEEKIRNPAPVDWRDSQSKDCAVITAIIDLITT
QEKPNLNAANTSWRNSAPTGHHRYFNDDER
NT seq
3153 nt
NT seq
+upstream
nt +downstream
nt
atgagttttgaaggctatggtggcagaagaggaggccgaagaggaggtcgaggatttgga
agagatggaagccgtgagaggtgggaccgtggagctgggtcaagtggcagtagacccccg
cggaactccgaatgggagtcgcgggaagaacggggagggcgaggtggaggtccaaaccgt
ccaccttcgcatctgaagggccgtgagatcggactgtggtatgcaaaatggggaggcctg
aagaggaaagaaaatgaaagaaaatcgcgtgcagttgttcagatggatgagtccagggag
cagcacatcactaatctgttgaacacagtccagagaggcccgtcaagggaagcccgtccc
tccacatcagacaactggcgttcagcgtcgtcagtgccagacagaggtggccactgttac
tttgatggagatgagccctctccggatgtcctgaagactgaaaccaaacaagaggaggtg
gagacgccggtacagaactctctgctcacctcccaacgttactttcccaaggaggcccct
aaagttgagccccaggaagaaaggacagaaacggagcaaatagggaaggataaagatctg
gagtacttatttcaggaggtggtcagggagaatgcactggaccaacagttaaagagggac
ctggagaggaagagggcagactccaaatacctggaaatgctgaaattcagagaaaaactt
ccctcctttggcaagaaagaggagctggtggaggtgatccggtccaaccaggtgcttgtg
gtcagtggagagacgggctgtggtaaaaccacccaggtgacccagtttatcttggacgac
tacattgacaggggcatgggctcactctgcagggtggtgtgcactcagccacgacgcatc
agtgccatatctgtagcagagagggtggctgcggaaagggcagaaagagtgggggatgga
aactcttgcggctaccagatccgcctgcagagtcggttaccacggaaacagggatcggtg
ctgtattgtacaacgggcattatactacagtggcttcgttcctcccctctgctgtcaacc
atcagccacttggttttagatgagatccatgagaggaacttgcactctgacgtcctgctc
atcattgtcaaggacctgctccgagtccgacacgacctcaaggtcatcctcatgagtgcc
actctaaatgctgagaagttctccagatactttgataactgtcctatgatccacatcccg
gggatgaccttccctgtgcaggagtttctattggaggatgtggtggagatgctcaggtac
cgtccccagaagcaagaacggagacccaggtggaagaggggtttcatgcaggctcaaaat
tcccgaccagagaaagagcagaaagaggcagagtacaaagagagctggccctgttacgcc
cgcacactccgagataggtactctgacagcaccattgaagtgttggagatgatggacgac
gacgataagattgacctggaactcgtagtccagctcatcaggcacatcgtactcagcgag
gaagaaggagcaatcctggtgtttctgccaggttgggacaacatcagcagcctcaacgac
ctcctcatgacccaacagatgtttaaatccgataggtttgtgatcattcctctacactcc
ctgatgcccactgtcacccagacatcggtgtttaaaaggccccctccaggagtccggaag
attgtcattgcaaccaatattgctgagaccagtattaccatcgatgatgtggtttttgtc
attgatggaggaaagattaaggagactcactttgacactcaaaacaacatcagcaccatg
gccgcagagtgggtcagcctggccaatgccaagcaaaggagaggacgagctggcagagtg
tgtccagggaagtgttatcacctgtataacagtctgagggcaagtctgatggaggcctac
cagctaccagagatcatgcgcacacctctggaggagctctgtctgcagatcaagatcctc
aagcttggacccatagccgagttcctgaggaaagctctggatcctcccacagaggaagcc
ataactctggccatcacgcacttaatggacctcaacgcactggagcgctctgaggctctg
acaccgttaggcttccacctggccaggctgcctgtggagcctcacatcgggaagctgatt
ctgtttggagctctgctgggctgtctggaccctgtcctcaccattgctgcctcgctcagc
ttcaaagaccctttcttcatacctctgggtaaggagaaggttgcagacatgaggagacga
actctgtccagggactcaaagagtgaccaccttaccattgtcaacgctttttgcggctgg
gaggaggcgaagctccgcagcaaccaggtcgagcgagagttctgttggagcaacttcctg
tccgccaacacactccagatgctgcacaacatgaaaggtcagttcgctgagcacctgctg
ggggctggcttcatcagcagcaaaaacccaaaagatccggaggcgaatttcaactcagag
aacgagaagctgatcaaggcagtcatagtggcaggactctaccccaaagtggccatgatt
aaacccagcggaagtaagaaaagaccggtgagagtgtacacaaagacagatggcaaggtg
tgtatccaccctaagtcagtgaatgctgaggagatccagttcaactactcctggctcatc
taccaccttaagatgaggaccagcagtatcttcctgtatgactgcaccgaggtgtctccg
ttctccctgctgttcttcggcggcgacatcaccattcagacggacgaggagaccatcgct
gtggacgagtggatcgtcttccagtccccagcgcgcattgcaaaccttgtcaagagtctg
aagaaggagctcgactcgctattggaagagaagatccgtaatcccgctcctgttgactgg
agagacagccaatccaaagactgcgctgtcatcactgccatcatagacctgatcaccacc
caggagaaacccaaccttaatgcagccaacactagttggaggaactctgcccccactgga
catcataggtatttcaacgacgacgagcgctaa
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