Esox lucius (northern pike): 105009761
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Entry
105009761 CDS
T04894
Symbol
cnga1
Name
(RefSeq) cGMP-gated cation channel alpha-1
KO
K04948
cyclic nucleotide gated channel alpha 1
Organism
els
Esox lucius (northern pike)
Pathway
els04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
els00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
105009761 (cnga1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
els04040
]
105009761 (cnga1)
Ion channels [BR:
els04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
105009761 (cnga1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
CLZ
cNMP_binding
EMC3_TMCO1
Collagen
Presenilin
Sec62
MDM10
Tim54
Ion_trans_2
CDC45
FapA
NPR3
PFF1_TM
Piezo_TM1-24
ADI
Peptidase_U57
Motif
Other DBs
NCBI-GeneID:
105009761
NCBI-ProteinID:
XP_028973631
LinkDB
All DBs
Position
LG24:complement(1831329..1856143)
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AA seq
700 aa
AA seq
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MSLGYWGNGLTSGNQVPPVMSLRVTPVKPAGHAPSQTFPAPLFQLHNKDGEMGERGETGE
TGETGETGETGETGETAENRCTRIPGKEVHLNFNNNNNNNEEEEEQKKKKKIEKKERKEQ
KQKEKQERRERKEQRKKDKEEKEKKEKEEKEKKEKEEKAKAEAPKEITVIDPSGNTYYNW
LFVITMPVMYNCTLIIARACFEELQSDYLVYWFIIDYVSDLVYLADMVFRTRTGYLEQGL
LVKDEKKLRDCYKKSLQFKLDLASMIPTDILYFYFGLNYPEIRLNKLLRFNRMLEFFQRT
ETRTNFPNVLRISNLVMYIVIIIHWNACLYYSFSKAVGFGADKFVYPDITDPEFGRLVRK
YAYSMYWSTLTLTTIGETPPPVKNSEYFFVVADFLVGVLIFATIVGNVGSMITNMNAARA
DFQARIDAIKQYMTFRKVTKDLEKRVIKWFDYLWTNKKAVDEREVLKFLPDKLRAEVAIN
VHLDTLKKVRIFADCEAGLLVELVLKLQPQVYSPGDYICKKGDIGREMYIIKEGKLAVVA
DDGIKQFVVLSDGSYFGEISILAIKGSRAGNRRTANIRSIGYSDLFCLSKDDLMEALTEY
PDAKAMLEEKGRQILMKDGLLDLEVAAQGPDPKDMEEKVEKMTETLDLLQTRYARLLAEH
EAAQSRLKRRVTKLEKVIPQVEEVTGTEGGVPPATSKETQ
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atgtctttgggttactggggcaacggattaacgtcaggaaaccaagtacctcctgtgatg
tcactgagggtaacccctgtgaagccggctggccacgcccccagccagaccttccccgca
ccgctcttccaactacacaacaaggatggggagatgggagagaggggggagacaggggag
acaggggagacgggggagacaggggagacaggggagacaggggagacggcggagaacagg
tgcacaaggatccccggaaaggaggttcacttaaatttcaacaacaacaacaacaacaat
gaggaagaggaagaacagaagaagaaaaagaaaattgagaagaaagagaggaaagagcaa
aaacaaaaagaaaagcaggagagaagggagaggaaggagcagagaaagaaagacaaagaa
gaaaaagagaagaaggagaaggaggagaaggagaagaaggagaaggaggagaaggccaaa
gccgaggcgcctaaagagatcacagtaatagacccttcagggaacacatactataactgg
ctcttcgtcattacaatgcctgtcatgtacaactgtaccctcatcatcgccagagcatgt
tttgaggagctccagtcagactacctggtctactggttcattattgactacgtctctgac
ctggtctacctggccgacatggtgttcagaaccaggacaggttacctggagcaaggtttg
ttggtgaaagatgagaagaagctccgagattgctacaaaaagtccctgcagtttaaactg
gacctggcctccatgatccccactgacatcctgtacttttactttggactaaactaccct
gagatcaggctcaacaagctgttaagattcaacaggatgttggagtttttccagaggaca
gagactcgtaccaactttcctaatgtgctgcgcatctccaacctggtcatgtacatcgtc
atcatcattcactggaacgcatgtctgtactactccttctccaaggctgttggtttcgga
gctgataagtttgtctacccagacataactgaccctgagtttggccgcctggtccggaag
tatgcctacagtatgtactggtccactctgaccctgaccacaattggagaaactccgccc
cctgtaaagaactcggaatacttcttcgttgttgcagactttttggttggcgtgttgatc
tttgccaccatcgtaggtaacgtgggttccatgatcaccaacatgaacgctgcccgggca
gacttccaggcccgcatagacgccatcaaacagtacatgaccttcaggaaggtcaccaag
gacctggagaagcgagtgatcaagtggtttgattacctgtggaccaataagaaggcagta
gacgagagggaggtcctcaagttccttccggataaactaagggcagaggtcgccatcaac
gttcacctggacacgttaaagaaggtgcgtatctttgctgactgtgaggctggcctcttg
gtggagctggtcctgaagcttcagccacaggtctacagtccgggcgactacatctgtaag
aagggtgacatcggacgtgagatgtacatcatcaaggaaggaaagctggccgttgttgcg
gacgacgggatcaaacagttcgtcgtccttagtgatggaagctactttggggagatcagc
atcctagcaataaagggctctagggcaggaaaccggaggacagccaacatcaggagtatc
gggtactcagatctcttctgcctgtctaaagacgacctcatggaggcattgacggagtac
ccagacgccaaggccatgctggaagagaaaggacgacagattctaatgaaggatggcctg
ctggacctggaggtggcagcacagggtccagacccaaaggacatggaggagaaggtggag
aagatgacagaaaccctagacttactccaaacgcgctacgcccggctcctggccgagcac
gaggcggcccagagccgactgaaacggcgtgtcaccaaactggagaaggtgattccacag
gtcgaggaggtcaccgggaccgagggaggtgttcccccggcaaccagcaaggagacccaa
tag
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