Esox lucius (northern pike): 105010010
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Entry
105010010 CDS
T04894
Name
(RefSeq) platelet-activating factor receptor isoform X1
KO
K04279
platelet-activating factor receptor
Organism
els
Esox lucius (northern pike)
Pathway
els04020
Calcium signaling pathway
els04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
els00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
105010010
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
105010010
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
els04030
]
105010010
G protein-coupled receptors [BR:
els04030
]
Rhodopsin family
Others
Platelet activating factor
105010010
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Ortholog
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GFIT
Motif
Pfam:
7tm_1
CitMHS
7TM_GPCR_Srx
DUF2207_C
Motif
Other DBs
NCBI-GeneID:
105010010
NCBI-ProteinID:
XP_028981415
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Position
LG15:2571289..2620652
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AA seq
378 aa
AA seq
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MSEFCEGGDAFAMEPIVKMVLKGNTSNDNTSFLDSEFRYTLFPVFYSIVFILGLTANSYV
LFVLHRLREAQTMNEIRIYMTNLTVADLLFVCALPFWIDYFLRRGDWIYSDILCRVSGTF
FFINTYCSVLFLTAISVNRYWAVTCPLDAASSNCWRRGALISAMIWVLTLSFSVVYLVKP
AVNKDQANVNRCFEGYHEDSEDSKRLVAITHLVIVSCFFLVFFIVIACNLLIARALLIQS
PSQALGSVSAKPRGVKPQALQMLCVVVVVFIVCFLPHHLVQYPWTLAVLQIQEGWGSTGW
NYTTRHWLNDAHQITLMLMGLNCLLDPVVYCFATRRFRLYIKDHLKRVGKGKHCSDTIAT
HISMTSQGLHNEQRSLKA
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaattttgcgagggaggagacgcgtttgcaatggagccgatcgtaaaaatggtc
ctcaaagggaacacgagcaatgacaacacatccttcctggactctgagttccgctacacc
ctcttcccagtgttctacagtatcgtcttcattcttggactgacggccaacagctatgtg
ctgtttgtgctgcatcgcctgcgtgaagcgcagaccatgaatgagatacgcatctacatg
accaatctgaccgtcgccgacctgctcttcgtctgcgccctccccttctggattgactac
ttccttcgccgaggtgactggatctacagcgacatcctgtgccgtgtcagcggcacgttc
ttcttcatcaacacctactgctccgtcctcttcctcactgccattagtgtaaaccgctac
tgggctgtcacatgcccactggacgccgcctcgtccaactgttggcgtcggggggctctt
atctcagcgatgatctgggtgctcaccctgtccttttccgtggtgtacctggtgaagccg
gccgtgaacaaggaccaggccaatgtaaaccgttgcttcgaaggttaccacgaagacagt
gaagacagcaagcgcctggtggccatcacacacctggttatcgtcagctgcttcttcttg
gtctttttcatcgtcatagcttgcaacctgctcatcgcccgggccctgctcatccaatcg
ccctcacaggcgttaggctctgtttctgccaagcccagaggggtgaagccccaggctctg
cagatgctgtgcgttgtggtggtggtgttcattgtgtgcttcctgccccatcacctggtt
cagtatccctggaccctggcggtgcttcagatccaggagggctggggcagtacaggctgg
aactacacgacacggcactggctgaatgacgcccaccagatcactctgatgctgatgggg
ctcaactgcctcctggatccagtggtgtactgctttgccactaggaggttccgtctgtac
atcaaggaccacctgaagagggtgggaaagggcaaacactgctctgacactattgccact
cacatctccatgacgagccaggggcttcataacgagcagcggtcgctcaaggcttaa
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